EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000011702 (Gene tree)
Gene ID: 102692760
Gene Symbol: rreb1b
Alias: si:ch211-279l9.6|si:ch211-279l9.7
Full Name: ras responsive element binding protein 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 71139 bases
Position: chrLG9:35577913-35649051
Accession: 102692760
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000014396	zf-C2H2	PF00096.26	1.2e-40	1	6
ENSLOCP00000014396	zf-C2H2	PF00096.26	1.2e-40	2	6
ENSLOCP00000014396	zf-C2H2	PF00096.26	1.2e-40	3	6
ENSLOCP00000014396	zf-C2H2	PF00096.26	1.2e-40	4	6
ENSLOCP00000014396	zf-C2H2	PF00096.26	1.2e-40	5	6
ENSLOCP00000014396	zf-C2H2	PF00096.26	1.2e-40	6	6
ENSLOCP00000014387	zf-C2H2	PF00096.26	4.8e-40	1	6
ENSLOCP00000014387	zf-C2H2	PF00096.26	4.8e-40	2	6
ENSLOCP00000014387	zf-C2H2	PF00096.26	4.8e-40	3	6
ENSLOCP00000014387	zf-C2H2	PF00096.26	4.8e-40	4	6
ENSLOCP00000014387	zf-C2H2	PF00096.26	4.8e-40	5	6
ENSLOCP00000014387	zf-C2H2	PF00096.26	4.8e-40	6	6
ENSLOCP00000014396	zf-met	PF12874.7	8.2e-07	1	1
ENSLOCP00000014387	zf-met	PF12874.7	2.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000014416	-	5417	XM_015354591	ENSLOCP00000014387	1666 (aa)	XP_015210077	W5N178
ENSLOCT00000014425	-	5249	XM_006634399	ENSLOCP00000014396	1536 (aa)	-	W5N187

Gene Model

Click here to download ENSLOCG00000011702's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000011702's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000011702	rreb1b	51	34.667	ENSLOCG00000003678	znf319b	65	48.980
ENSLOCG00000011702	rreb1b	50	40.000	ENSLOCG00000000947	znf341	50	43.396
ENSLOCG00000011702	rreb1b	51	34.667	ENSLOCG00000000544	znf319b	65	48.980
ENSLOCG00000011702	rreb1b	71	35.000	ENSLOCG00000004208	-	79	52.174
ENSLOCG00000011702	rreb1b	51	33.333	ENSLOCG00000007514	zbtb41	56	41.509
ENSLOCG00000011702	rreb1b	51	37.805	ENSLOCG00000016466	-	88	49.091