EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000011841 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 29939 bases
Position: chrLG12:35488893-35518831
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000014560	MMR_HSR1	PF01926.23	9.7e-37	1	3
ENSLOCP00000014560	MMR_HSR1	PF01926.23	9.7e-37	2	3
ENSLOCP00000014560	MMR_HSR1	PF01926.23	9.7e-37	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000014589	-	3048	-	ENSLOCP00000014560	1016 (aa)	-	W5N1Q1

Gene Model

Click here to download ENSLOCG00000011841's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000011841's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000011841	-	73	52.717	ENSLOCG00000011913	-	95	52.717
ENSLOCG00000011841	-	73	42.708	ENSLOCG00000003059	-	91	41.935
ENSLOCG00000011841	-	93	47.807	ENSLOCG00000011749	-	99	47.807
ENSLOCG00000011841	-	90	45.522	ENSLOCG00000002945	-	95	45.522
ENSLOCG00000011841	-	85	53.043	ENSLOCG00000017850	-	75	53.043
ENSLOCG00000011841	-	75	55.670	ENSLOCG00000017851	-	100	55.670
ENSLOCG00000011841	-	75	47.802	ENSLOCG00000017852	-	76	47.802
ENSLOCG00000011841	-	92	53.425	ENSLOCG00000011715	-	77	55.825
ENSLOCG00000011841	-	87	42.857	ENSLOCG00000012075	-	98	42.857
ENSLOCG00000011841	-	93	69.315	ENSLOCG00000011883	-	94	69.589
ENSLOCG00000011841	-	86	53.883	ENSLOCG00000000328	-	98	50.216
ENSLOCG00000011841	-	82	51.562	ENSLOCG00000017119	si:dkey-125e8.4	85	51.852
ENSLOCG00000011841	-	86	43.602	ENSLOCG00000000517	-	76	42.718
ENSLOCG00000011841	-	90	44.355	ENSLOCG00000000511	-	51	45.161
ENSLOCG00000011841	-	80	41.791	ENSLOCG00000000082	-	93	41.706
ENSLOCG00000011841	-	91	56.436	ENSLOCG00000011925	-	100	56.436
ENSLOCG00000011841	-	93	40.553	ENSLOCG00000013437	-	99	40.553
ENSLOCG00000011841	-	90	40.387	ENSLOCG00000000257	-	100	40.387
ENSLOCG00000011841	-	93	51.351	ENSLOCG00000011853	-	97	47.575
ENSLOCG00000011841	-	83	55.556	ENSLOCG00000011850	-	83	56.938
ENSLOCG00000011841	-	92	53.494	ENSLOCG00000011761	-	82	51.786
ENSLOCG00000011841	-	78	42.347	ENSLOCG00000000385	-	76	40.969
ENSLOCG00000011841	-	89	42.857	ENSLOCG00000008631	-	76	45.699
ENSLOCG00000011841	-	74	51.872	ENSLOCG00000011904	-	95	51.872
ENSLOCG00000011841	-	84	51.000	ENSLOCG00000011755	-	83	48.858
ENSLOCG00000011841	-	82	54.286	ENSLOCG00000000277	-	69	53.991
ENSLOCG00000011841	-	93	55.924	ENSLOCG00000000272	-	98	52.703
ENSLOCG00000011841	-	89	41.463	ENSLOCG00000011879	-	99	41.463
ENSLOCG00000011841	-	92	57.009	ENSLOCG00000000336	-	99	56.667
ENSLOCG00000011841	-	86	41.346	ENSLOCG00000018072	-	99	43.147
ENSLOCG00000011841	-	74	50.270	ENSLOCG00000018071	-	69	46.193
ENSLOCG00000011841	-	84	40.330	ENSLOCG00000011098	-	100	40.330
ENSLOCG00000011841	-	80	41.089	ENSLOCG00000000460	-	54	42.857
ENSLOCG00000011841	-	97	39.437	ENSLOCG00000016496	-	79	39.437