EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000011853 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 6285 bases
Position: chrLG12:35532346-35538630
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000014575	MMR_HSR1	PF01926.23	9.5e-26	1	3
ENSLOCP00000014575	MMR_HSR1	PF01926.23	9.5e-26	2	3
ENSLOCP00000014575	MMR_HSR1	PF01926.23	9.5e-26	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000014604	-	1977	-	ENSLOCP00000014575	659 (aa)	-	W5N1R6

Gene Model

Click here to download ENSLOCG00000011853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000011853's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000011853	-	93	55.051	ENSLOCG00000011755	-	88	54.359
ENSLOCG00000011853	-	97	78.283	ENSLOCG00000011850	-	84	78.283
ENSLOCG00000011853	-	95	49.223	ENSLOCG00000000257	-	100	49.223
ENSLOCG00000011853	-	97	47.181	ENSLOCG00000011883	-	93	47.181
ENSLOCG00000011853	-	96	42.927	ENSLOCG00000011098	-	100	42.927
ENSLOCG00000011853	-	97	66.197	ENSLOCG00000000336	-	99	64.126
ENSLOCG00000011853	-	99	45.249	ENSLOCG00000013437	-	99	45.249
ENSLOCG00000011853	-	94	40.385	ENSLOCG00000011879	-	99	40.385
ENSLOCG00000011853	-	96	40.909	ENSLOCG00000008631	-	74	42.473
ENSLOCG00000011853	-	99	84.234	ENSLOCG00000000272	-	98	84.234
ENSLOCG00000011853	-	93	53.234	ENSLOCG00000000277	-	69	52.941
ENSLOCG00000011853	-	97	55.769	ENSLOCG00000011749	-	99	57.207
ENSLOCG00000011853	-	95	53.922	ENSLOCG00000011715	-	72	53.922
ENSLOCG00000011853	-	90	50.725	ENSLOCG00000012075	-	97	50.725
ENSLOCG00000011853	-	94	41.538	ENSLOCG00000016496	-	67	41.538
ENSLOCG00000011853	-	83	46.277	ENSLOCG00000011913	-	94	46.277
ENSLOCG00000011853	-	98	56.459	ENSLOCG00000011761	-	81	59.649
ENSLOCG00000011853	-	96	62.871	ENSLOCG00000011925	-	100	62.871
ENSLOCG00000011853	-	89	46.154	ENSLOCG00000000082	-	90	46.154
ENSLOCG00000011853	-	96	47.030	ENSLOCG00000000328	-	99	47.030
ENSLOCG00000011853	-	83	48.663	ENSLOCG00000017852	-	85	44.298
ENSLOCG00000011853	-	87	76.842	ENSLOCG00000017851	-	100	76.842
ENSLOCG00000011853	-	94	47.475	ENSLOCG00000017850	-	77	47.475
ENSLOCG00000011853	-	97	47.575	ENSLOCG00000011841	-	93	51.351
ENSLOCG00000011853	-	85	43.085	ENSLOCG00000003059	-	89	43.085
ENSLOCG00000011853	-	85	50.270	ENSLOCG00000018071	-	71	48.000
ENSLOCG00000011853	-	93	45.408	ENSLOCG00000018072	-	92	45.408
ENSLOCG00000011853	-	93	43.411	ENSLOCG00000002945	-	73	43.411
ENSLOCG00000011853	-	94	52.792	ENSLOCG00000017119	si:dkey-125e8.4	85	52.850
ENSLOCG00000011853	-	92	48.677	ENSLOCG00000000460	-	58	48.677
ENSLOCG00000011853	-	92	47.423	ENSLOCG00000000517	-	77	47.423
ENSLOCG00000011853	-	84	45.946	ENSLOCG00000011904	-	95	45.946
ENSLOCG00000011853	-	88	45.500	ENSLOCG00000000385	-	76	45.500