EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000011879 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 7773 bases
Position: chrLG12:35592565-35600337
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000014603	MMR_HSR1	PF01926.23	3.8e-24	1	3
ENSLOCP00000014603	MMR_HSR1	PF01926.23	3.8e-24	2	3
ENSLOCP00000014603	MMR_HSR1	PF01926.23	3.8e-24	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000014632	-	1839	-	ENSLOCP00000014603	613 (aa)	-	W5N1U4

Gene Model

Click here to download ENSLOCG00000011879's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000011879's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000011879	-	89	46.154	ENSLOCG00000018071	-	58	46.154
ENSLOCG00000011879	-	84	44.279	ENSLOCG00000018072	-	80	44.279
ENSLOCG00000011879	-	85	45.736	ENSLOCG00000002945	-	76	45.736
ENSLOCG00000011879	-	82	46.565	ENSLOCG00000017852	-	72	46.565
ENSLOCG00000011879	-	83	49.727	ENSLOCG00000017851	-	94	49.727
ENSLOCG00000011879	-	84	48.387	ENSLOCG00000017850	-	61	48.387
ENSLOCG00000011879	-	99	41.463	ENSLOCG00000011841	-	89	41.463
ENSLOCG00000011879	-	99	44.324	ENSLOCG00000011098	-	98	44.324
ENSLOCG00000011879	-	83	50.265	ENSLOCG00000011755	-	68	50.265
ENSLOCG00000011879	-	84	52.778	ENSLOCG00000011904	-	95	52.778
ENSLOCG00000011879	-	91	44.792	ENSLOCG00000000385	-	62	44.792
ENSLOCG00000011879	-	83	62.937	ENSLOCG00000017119	si:dkey-125e8.4	73	62.937
ENSLOCG00000011879	-	83	46.212	ENSLOCG00000012075	-	89	46.212
ENSLOCG00000011879	-	98	53.804	ENSLOCG00000000257	-	100	53.804
ENSLOCG00000011879	-	84	53.571	ENSLOCG00000011850	-	74	53.571
ENSLOCG00000011879	-	99	40.385	ENSLOCG00000011853	-	94	40.385
ENSLOCG00000011879	-	91	44.615	ENSLOCG00000000517	-	59	45.128
ENSLOCG00000011879	-	83	51.538	ENSLOCG00000008631	-	66	51.538
ENSLOCG00000011879	-	99	51.852	ENSLOCG00000011883	-	94	51.852
ENSLOCG00000011879	-	98	40.244	ENSLOCG00000011749	-	92	40.244
ENSLOCG00000011879	-	83	46.715	ENSLOCG00000003059	-	93	46.715
ENSLOCG00000011879	-	99	43.333	ENSLOCG00000000336	-	99	43.333
ENSLOCG00000011879	-	84	49.462	ENSLOCG00000011715	-	61	49.462
ENSLOCG00000011879	-	92	53.285	ENSLOCG00000000277	-	60	53.285
ENSLOCG00000011879	-	88	54.483	ENSLOCG00000000272	-	93	54.483
ENSLOCG00000011879	-	98	37.255	ENSLOCG00000011761	-	77	37.418
ENSLOCG00000011879	-	83	56.944	ENSLOCG00000011913	-	96	56.944
ENSLOCG00000011879	-	98	48.462	ENSLOCG00000013437	-	90	48.462
ENSLOCG00000011879	-	84	43.842	ENSLOCG00000000082	-	72	43.842
ENSLOCG00000011879	-	86	49.306	ENSLOCG00000000328	-	78	49.306
ENSLOCG00000011879	-	100	50.811	ENSLOCG00000011925	-	100	50.811
ENSLOCG00000011879	-	82	38.251	ENSLOCG00000016496	-	57	38.251