EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000011883 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: GTPase IMAP family member 8-like
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 6203 bases
Position: chrLG12:35638522-35644724
Accession: 102686840
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000014606	MMR_HSR1	PF01926.23	2.9e-22	1	2
ENSLOCP00000014606	MMR_HSR1	PF01926.23	2.9e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000014635	-	4848	XM_006636913	ENSLOCP00000014606	360 (aa)	XP_006636976	W5N1U7

Gene Model

Click here to download ENSLOCG00000011883's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000011883's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000011883	-	83	51.667	ENSLOCG00000008631	-	61	52.101
ENSLOCG00000011883	-	93	61.644	ENSLOCG00000011761	-	78	62.069
ENSLOCG00000011883	-	94	51.852	ENSLOCG00000011879	-	99	51.852
ENSLOCG00000011883	-	92	54.545	ENSLOCG00000000257	-	99	54.545
ENSLOCG00000011883	-	83	42.697	ENSLOCG00000016496	-	59	42.697
ENSLOCG00000011883	-	79	47.475	ENSLOCG00000003059	-	88	47.475
ENSLOCG00000011883	-	84	44.954	ENSLOCG00000011715	-	64	44.954
ENSLOCG00000011883	-	83	50.000	ENSLOCG00000000385	-	73	50.000
ENSLOCG00000011883	-	93	50.000	ENSLOCG00000011749	-	94	50.000
ENSLOCG00000011883	-	76	51.020	ENSLOCG00000017852	-	68	51.020
ENSLOCG00000011883	-	83	47.222	ENSLOCG00000017850	-	63	47.222
ENSLOCG00000011883	-	85	55.652	ENSLOCG00000017851	-	98	55.652
ENSLOCG00000011883	-	93	49.254	ENSLOCG00000011850	-	76	49.254
ENSLOCG00000011883	-	93	47.181	ENSLOCG00000011853	-	97	47.181
ENSLOCG00000011883	-	93	53.782	ENSLOCG00000000272	-	96	53.782
ENSLOCG00000011883	-	79	51.256	ENSLOCG00000011904	-	98	51.256
ENSLOCG00000011883	-	92	40.609	ENSLOCG00000013437	-	92	40.609
ENSLOCG00000011883	-	85	55.051	ENSLOCG00000000328	-	78	55.051
ENSLOCG00000011883	-	84	49.749	ENSLOCG00000017119	si:dkey-125e8.4	76	49.749
ENSLOCG00000011883	-	78	50.000	ENSLOCG00000012075	-	85	50.000
ENSLOCG00000011883	-	78	48.039	ENSLOCG00000000082	-	69	48.039
ENSLOCG00000011883	-	93	41.919	ENSLOCG00000011098	-	99	41.919
ENSLOCG00000011883	-	84	40.936	ENSLOCG00000002945	-	72	40.936
ENSLOCG00000011883	-	93	56.034	ENSLOCG00000011925	-	100	56.034
ENSLOCG00000011883	-	87	51.261	ENSLOCG00000011755	-	69	53.704
ENSLOCG00000011883	-	94	69.589	ENSLOCG00000011841	-	93	69.315
ENSLOCG00000011883	-	86	50.549	ENSLOCG00000011913	-	98	50.549
ENSLOCG00000011883	-	81	46.196	ENSLOCG00000018071	-	69	45.946
ENSLOCG00000011883	-	86	40.816	ENSLOCG00000018072	-	85	40.816
ENSLOCG00000011883	-	90	54.545	ENSLOCG00000000277	-	65	54.545
ENSLOCG00000011883	-	93	57.265	ENSLOCG00000000336	-	99	57.265
ENSLOCG00000011883	-	79	47.674	ENSLOCG00000000517	-	62	47.674