EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000011925 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 9309 bases
Position: chrLG12:35744531-35753839
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000014657	MMR_HSR1	PF01926.23	2.1e-27	1	3
ENSLOCP00000014657	MMR_HSR1	PF01926.23	2.1e-27	2	3
ENSLOCP00000014657	MMR_HSR1	PF01926.23	2.1e-27	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000014686	-	1839	-	ENSLOCP00000014657	613 (aa)	-	W5N1Z8

Gene Model

Click here to download ENSLOCG00000011925's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000011925's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000011925	-	99	47.525	ENSLOCG00000013437	-	94	47.525
ENSLOCG00000011925	-	100	41.935	ENSLOCG00000011098	-	99	41.935
ENSLOCG00000011925	-	91	44.271	ENSLOCG00000011904	-	96	44.271
ENSLOCG00000011925	-	93	43.939	ENSLOCG00000002945	-	80	43.939
ENSLOCG00000011925	-	90	48.108	ENSLOCG00000008631	-	61	48.108
ENSLOCG00000011925	-	92	55.385	ENSLOCG00000011755	-	71	55.385
ENSLOCG00000011925	-	100	62.871	ENSLOCG00000011853	-	96	62.871
ENSLOCG00000011925	-	93	67.327	ENSLOCG00000011850	-	76	67.327
ENSLOCG00000011925	-	100	58.416	ENSLOCG00000011761	-	79	58.416
ENSLOCG00000011925	-	93	44.845	ENSLOCG00000000082	-	80	45.405
ENSLOCG00000011925	-	100	63.636	ENSLOCG00000000336	-	99	63.636
ENSLOCG00000011925	-	100	56.034	ENSLOCG00000011883	-	93	56.034
ENSLOCG00000011925	-	95	57.711	ENSLOCG00000000277	-	64	57.711
ENSLOCG00000011925	-	100	74.257	ENSLOCG00000000272	-	96	74.257
ENSLOCG00000011925	-	94	49.254	ENSLOCG00000017119	si:dkey-125e8.4	85	49.254
ENSLOCG00000011925	-	92	45.946	ENSLOCG00000018072	-	82	45.946
ENSLOCG00000011925	-	89	48.634	ENSLOCG00000018071	-	63	48.634
ENSLOCG00000011925	-	100	50.811	ENSLOCG00000011879	-	100	50.811
ENSLOCG00000011925	-	93	45.833	ENSLOCG00000000385	-	66	45.833
ENSLOCG00000011925	-	100	58.911	ENSLOCG00000011749	-	96	58.911
ENSLOCG00000011925	-	90	41.530	ENSLOCG00000003059	-	90	41.530
ENSLOCG00000011925	-	91	46.392	ENSLOCG00000017852	-	72	46.392
ENSLOCG00000011925	-	95	44.898	ENSLOCG00000000517	-	64	44.898
ENSLOCG00000011925	-	89	52.198	ENSLOCG00000011913	-	92	52.198
ENSLOCG00000011925	-	100	49.171	ENSLOCG00000000257	-	100	49.171
ENSLOCG00000011925	-	92	52.970	ENSLOCG00000011715	-	67	52.970
ENSLOCG00000011925	-	92	48.936	ENSLOCG00000000328	-	79	48.936
ENSLOCG00000011925	-	92	70.466	ENSLOCG00000017851	-	100	70.466
ENSLOCG00000011925	-	93	49.500	ENSLOCG00000017850	-	67	49.500
ENSLOCG00000011925	-	90	42.703	ENSLOCG00000016496	-	54	42.703
ENSLOCG00000011925	-	100	56.436	ENSLOCG00000011841	-	91	56.436
ENSLOCG00000011925	-	93	46.465	ENSLOCG00000012075	-	89	47.283