EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000011956 (Gene tree)
Gene ID: 102688039
Gene Symbol: DDX41
Alias: ABS|MGC8828
Full Name: DEAD-box helicase 41
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 15668 bases
Position: chrLG6:36672876-36688543
Accession: 102688039
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000014704	DEAD	PF00270.29	1.9e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000014733	DDX41-201	2586	XM_006631930	ENSLOCP00000014704	616 (aa)	XP_006631993	W5N245

Gene Model

Click here to download ENSLOCG00000011956's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000011956's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000011956	DDX41	58	33.871	ENSLOCG00000002119	ddx49	74	33.871
ENSLOCG00000011956	DDX41	68	38.128	ENSLOCG00000002122	ddx3xa	64	36.923
ENSLOCG00000011956	DDX41	57	30.084	ENSLOCG00000000770	ddx6	71	30.141
ENSLOCG00000011956	DDX41	65	40.185	ENSLOCG00000007385	ddx23	52	40.185
ENSLOCG00000011956	DDX41	57	34.783	ENSLOCG00000005828	ddx55	60	34.783
ENSLOCG00000011956	DDX41	65	39.609	ENSLOCG00000013534	ddx5	64	39.609
ENSLOCG00000011956	DDX41	62	31.008	ENSLOCG00000006534	DDX39A	87	31.008
ENSLOCG00000011956	DDX41	54	34.311	ENSLOCG00000003108	ddx18	54	33.333
ENSLOCG00000011956	DDX41	62	31.429	ENSLOCG00000000847	eif4a2	90	31.429
ENSLOCG00000011956	DDX41	60	32.615	ENSLOCG00000015796	eif4a3	86	32.615
ENSLOCG00000011956	DDX41	66	36.253	ENSLOCG00000007710	ddx59	63	36.253
ENSLOCG00000011956	DDX41	63	33.659	ENSLOCG00000002074	ddx10	53	33.659
ENSLOCG00000011956	DDX41	63	40.554	ENSLOCG00000016170	ddx43	58	40.554
ENSLOCG00000011956	DDX41	62	32.208	ENSLOCG00000014465	eif4a1b	91	31.948
ENSLOCG00000011956	DDX41	64	39.259	ENSLOCG00000010887	ddx4	89	37.788