EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000012075 (Gene tree)
Gene ID: 102694308
Gene Symbol: -
Alias: -
Full Name: GTPase IMAP family member 4-like
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 4298 bases
Position: chrLG12:36262889-36267186
Accession: 102694308
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000014868	MMR_HSR1	PF01926.23	1.4e-06	1	1
ENSLOCP00000014861	MMR_HSR1	PF01926.23	1.7e-06	1	1
ENSLOCP00000014856	MMR_HSR1	PF01926.23	2.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000014890	-	678	-	ENSLOCP00000014861	226 (aa)	-	W5N2K2
ENSLOCT00000014885	-	2288	XM_006636947	ENSLOCP00000014856	265 (aa)	XP_015215205	W5N2J7
ENSLOCT00000014897	-	636	-	ENSLOCP00000014868	212 (aa)	-	W5N2K9

Gene Model

Click here to download ENSLOCG00000012075's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000012075's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000012075	-	91	38.500	ENSLOCG00000013437	-	89	37.745
ENSLOCG00000012075	-	86	63.102	ENSLOCG00000000460	-	50	53.086
ENSLOCG00000012075	-	89	46.212	ENSLOCG00000011879	-	83	46.212
ENSLOCG00000012075	-	95	60.680	ENSLOCG00000000082	-	88	57.511
ENSLOCG00000012075	-	98	42.857	ENSLOCG00000011841	-	87	42.857
ENSLOCG00000012075	-	83	43.333	ENSLOCG00000003059	-	85	42.778
ENSLOCG00000012075	-	93	38.235	ENSLOCG00000011755	-	90	35.573
ENSLOCG00000012075	-	84	43.478	ENSLOCG00000011913	-	92	43.478
ENSLOCG00000012075	-	99	48.131	ENSLOCG00000002945	-	76	48.131
ENSLOCG00000012075	-	91	37.879	ENSLOCG00000017850	-	66	37.500
ENSLOCG00000012075	-	88	42.188	ENSLOCG00000017851	-	98	42.188
ENSLOCG00000012075	-	88	88.119	ENSLOCG00000017852	-	77	88.119
ENSLOCG00000012075	-	94	58.333	ENSLOCG00000000517	-	69	56.682
ENSLOCG00000012075	-	99	43.066	ENSLOCG00000011761	-	73	43.500
ENSLOCG00000012075	-	91	34.158	ENSLOCG00000008631	-	65	34.500
ENSLOCG00000012075	-	93	44.878	ENSLOCG00000000328	-	91	42.174
ENSLOCG00000012075	-	85	50.000	ENSLOCG00000011883	-	78	50.000
ENSLOCG00000012075	-	93	40.104	ENSLOCG00000000257	-	93	40.104
ENSLOCG00000012075	-	89	43.590	ENSLOCG00000017119	si:dkey-125e8.4	85	41.475
ENSLOCG00000012075	-	89	47.283	ENSLOCG00000011925	-	93	46.465
ENSLOCG00000012075	-	95	41.546	ENSLOCG00000011715	-	67	41.748
ENSLOCG00000012075	-	96	62.201	ENSLOCG00000018072	-	92	60.619
ENSLOCG00000012075	-	89	47.692	ENSLOCG00000018071	-	66	46.262
ENSLOCG00000012075	-	91	58.854	ENSLOCG00000000385	-	80	53.782
ENSLOCG00000012075	-	97	50.725	ENSLOCG00000011853	-	90	50.725
ENSLOCG00000012075	-	94	41.262	ENSLOCG00000011850	-	72	42.051
ENSLOCG00000012075	-	94	44.231	ENSLOCG00000000272	-	61	44.231
ENSLOCG00000012075	-	98	39.216	ENSLOCG00000000277	-	63	39.216
ENSLOCG00000012075	-	89	45.745	ENSLOCG00000000336	-	75	46.809
ENSLOCG00000012075	-	93	53.234	ENSLOCG00000016496	-	75	46.617
ENSLOCG00000012075	-	92	38.000	ENSLOCG00000011749	-	90	38.000
ENSLOCG00000012075	-	85	39.894	ENSLOCG00000011904	-	93	39.362
ENSLOCG00000012075	-	93	55.495	ENSLOCG00000011098	-	98	55.495