EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000012267 (Gene tree)
Gene ID: 102685058
Gene Symbol: rbfox3a
Alias: rbfox3
Full Name: RNA binding fox-1 homolog 3
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 164857 bases
Position: chrLG10:34058133-34222989
Accession: 102685058
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000015101	Fox-1_C	PF12414.8	6.3e-46	1	1
ENSLOCP00000015109	Fox-1_C	PF12414.8	2.2e-45	1	1
ENSLOCP00000015109	RRM_1	PF00076.22	6.7e-19	1	1
ENSLOCP00000015101	RRM_1	PF00076.22	1.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000015130	-	1221	XM_006635130	ENSLOCP00000015101	332 (aa)	XP_006635193	W5N392
ENSLOCT00000015138	-	1161	-	ENSLOCP00000015109	386 (aa)	-	W5N3A0

Gene Model

Click here to download ENSLOCG00000012267's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000012267's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000012267	rbfox3a	100	71.823	ENSLOCG00000006675	rbfox1	98	68.564