EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000012290 (Gene tree)
Gene ID: 102696777
Gene Symbol: larp4b
Alias: zgc:153918
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 52215 bases
Position: chrLG9:40011699-40063913
Accession: 102696777
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000015136	La	PF05383.17	7e-14	1	1
ENSLOCP00000015132	La	PF05383.17	7.5e-14	1	1
ENSLOCP00000015124	La	PF05383.17	7.9e-14	1	1
ENSLOCP00000015119	La	PF05383.17	8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000015165	-	2167	-	ENSLOCP00000015136	690 (aa)	-	W5N3C7
ENSLOCT00000015153	-	2283	-	ENSLOCP00000015124	760 (aa)	-	W5N3B5
ENSLOCT00000015161	-	2208	XM_006634506	ENSLOCP00000015132	735 (aa)	XP_006634569	W5N3C3
ENSLOCT00000015148	-	2325	-	ENSLOCP00000015119	774 (aa)	-	W5N3B0

Gene Model

Click here to download ENSLOCG00000012290's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000012290's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000012290	larp4b	98	38.161	ENSLOCG00000007113	larp4ab	83	40.351