EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000012510 (Gene tree)
Gene ID: 102692482
Gene Symbol: hnrnph1
Alias: zgc:77712
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 14044 bases
Position: chrLG6:39717282-39731325
Accession: 102692482
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000015406	zf-RNPHF	PF08080.12	1.5e-14	1	1
ENSLOCP00000015402	zf-RNPHF	PF08080.12	5.4e-12	1	1
ENSLOCP00000015402	RRM_1	PF00076.22	1.3e-31	1	3
ENSLOCP00000015402	RRM_1	PF00076.22	1.3e-31	2	3
ENSLOCP00000015402	RRM_1	PF00076.22	1.3e-31	3	3
ENSLOCP00000015406	RRM_1	PF00076.22	1.6e-31	1	3
ENSLOCP00000015406	RRM_1	PF00076.22	1.6e-31	2	3
ENSLOCP00000015406	RRM_1	PF00076.22	1.6e-31	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000015435	-	1441	XM_006631953	ENSLOCP00000015406	468 (aa)	XP_006632016	W5N447
ENSLOCT00000015431	-	3516	-	ENSLOCP00000015402	443 (aa)	-	W5N443

Gene Model

Click here to download ENSLOCG00000012510's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000012510's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000012510	hnrnph1	90	61.391	ENSLOCG00000009247	hnrnph3	91	62.069
ENSLOCG00000012510	hnrnph1	64	41.250	ENSLOCG00000008062	esrp2	52	41.250
ENSLOCG00000012510	hnrnph1	88	42.697	ENSLOCG00000011589	GRSF1	75	63.014