EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000012566 (Gene tree)
Gene ID: 102695880
Gene Symbol: rab5c
Alias: wu:fb98b08|wu:fi16g01
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 6279 bases
Position: chrLG15:5088708-5094986
Accession: 102695880
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000015470	MMR_HSR1	PF01926.23	9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000015499	-	642	XM_006638212	ENSLOCP00000015470	214 (aa)	XP_006638275	W5N4B1

Gene Model

Click here to download ENSLOCG00000012566's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000012566's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000012566	rab5c	91	50.000	ENSLOCG00000007029	rab22a	98	50.000
ENSLOCG00000012566	rab5c	79	33.526	ENSLOCG00000010004	rheb	93	33.526
ENSLOCG00000012566	rab5c	90	44.615	ENSLOCG00000016037	rab1ab	95	44.615
ENSLOCG00000012566	rab5c	83	43.956	ENSLOCG00000015576	zgc:100918	88	43.956
ENSLOCG00000012566	rab5c	78	42.105	ENSLOCG00000005904	zgc:101559	73	42.105
ENSLOCG00000012566	rab5c	69	33.775	ENSLOCG00000002825	rab36	66	33.775
ENSLOCG00000012566	rab5c	69	35.811	ENSLOCG00000016999	rab23	66	36.875
ENSLOCG00000012566	rab5c	78	32.934	ENSLOCG00000015334	kras	96	31.868
ENSLOCG00000012566	rab5c	100	88.318	ENSLOCG00000006591	rab5ab	99	88.318
ENSLOCG00000012566	rab5c	90	37.500	ENSLOCG00000015358	rab33a	82	37.500
ENSLOCG00000012566	rab5c	93	34.314	ENSLOCG00000017482	rab9b	99	34.314
ENSLOCG00000012566	rab5c	93	33.824	ENSLOCG00000018352	rab9b	99	33.824
ENSLOCG00000012566	rab5c	76	34.756	ENSLOCG00000003467	si:dkey-34d22.5	76	34.756
ENSLOCG00000012566	rab5c	90	40.796	ENSLOCG00000008865	rab11al	93	40.796
ENSLOCG00000012566	rab5c	80	38.012	ENSLOCG00000012406	rab15	81	38.012
ENSLOCG00000012566	rab5c	60	31.061	ENSLOCG00000012467	arl8a	66	31.061
ENSLOCG00000012566	rab5c	84	31.111	ENSLOCG00000010440	nras	94	31.111
ENSLOCG00000012566	rab5c	77	37.349	ENSLOCG00000006748	-	78	37.349
ENSLOCG00000012566	rab5c	81	42.529	ENSLOCG00000015191	rab41	82	42.529
ENSLOCG00000012566	rab5c	55	31.967	ENSLOCG00000010957	arl8bb	61	31.967
ENSLOCG00000012566	rab5c	76	36.364	ENSLOCG00000015825	-	77	36.364
ENSLOCG00000012566	rab5c	81	42.697	ENSLOCG00000014547	RAB7A	85	42.697
ENSLOCG00000012566	rab5c	79	31.792	ENSLOCG00000016464	si:cabz01085950.1	85	31.792
ENSLOCG00000012566	rab5c	90	34.328	ENSLOCG00000017414	rab9a	97	34.328
ENSLOCG00000012566	rab5c	90	33.824	ENSLOCG00000014749	si:dkey-13a21.4	97	33.824
ENSLOCG00000012566	rab5c	76	32.515	ENSLOCG00000007682	rhebl1	88	32.515
ENSLOCG00000012566	rab5c	91	37.438	ENSLOCG00000010535	rab33ba	86	37.438
ENSLOCG00000012566	rab5c	89	41.361	ENSLOCG00000007491	rab18a	93	41.451
ENSLOCG00000012566	rab5c	76	35.976	ENSLOCG00000003453	rab42a	77	35.976
ENSLOCG00000012566	rab5c	76	37.195	ENSLOCG00000014927	rab39bb	76	37.195
ENSLOCG00000012566	rab5c	90	37.949	ENSLOCG00000001637	rab35b	94	37.949
ENSLOCG00000012566	rab5c	78	38.953	ENSLOCG00000002680	rab12	69	38.953
ENSLOCG00000012566	rab5c	71	48.684	ENSLOCG00000008881	rab25a	88	48.684
ENSLOCG00000012566	rab5c	80	32.584	ENSLOCG00000000684	hrasb	93	32.584
ENSLOCG00000012566	rab5c	55	41.880	ENSLOCG00000016767	rabl2	51	41.880
ENSLOCG00000012566	rab5c	79	42.262	ENSLOCG00000005884	rab30	83	42.262
ENSLOCG00000012566	rab5c	73	30.247	ENSLOCG00000017737	-	79	30.247
ENSLOCG00000012566	rab5c	73	34.375	ENSLOCG00000005802	rab34a	60	34.375
ENSLOCG00000012566	rab5c	90	41.063	ENSLOCG00000014692	zgc:171927	95	41.063
ENSLOCG00000012566	rab5c	87	40.107	ENSLOCG00000005509	rab14	87	40.107
ENSLOCG00000012566	rab5c	75	44.099	ENSLOCG00000005108	rab2a	76	44.099
ENSLOCG00000012566	rab5c	75	48.447	ENSLOCG00000013835	rab11a	74	48.447