EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000012966 (Gene tree)
Gene ID: 102690533
Gene Symbol: rbm47
Alias: si:ch211-241e15.2|wu:fj94a03
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 60046 bases
Position: chrLG4:62632276-62692321
Accession: 102690533
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000015968	RRM_1	PF00076.22	3.2e-39	1	3
ENSLOCP00000015968	RRM_1	PF00076.22	3.2e-39	2	3
ENSLOCP00000015968	RRM_1	PF00076.22	3.2e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000015998	-	7017	XM_006629919	ENSLOCP00000015968	615 (aa)	XP_006629982	W5N5Q9

Gene Model

Click here to download ENSLOCG00000012966's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000012966's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000012966	rbm47	75	53.119	ENSLOCG00000006302	a1cf	93	50.785
ENSLOCG00000012966	rbm47	52	52.615	ENSLOCG00000016919	syncripl	89	46.411
ENSLOCG00000012966	rbm47	50	68.608	ENSLOCG00000008298	rbm46	67	69.903
ENSLOCG00000012966	rbm47	52	54.969	ENSLOCG00000004400	hnrnpr	67	49.165