EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000013377 (Gene tree)
Gene ID: 102699036
Gene Symbol: tnrc6c1
Alias: fj17e06|si:dkey-54k13.1|unm_sa1472|wu:fj17e06
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 59042 bases
Position: chrLG10:39486375-39545416
Accession: 102699036
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000016491	Ago_hook	PF10427.9	5.4e-13	1	1
ENSLOCP00000016495	Ago_hook	PF10427.9	8.7e-13	1	1
ENSLOCP00000016495	RRM_1	PF00076.22	8.4e-05	1	1
ENSLOCP00000016491	RRM_1	PF00076.22	8.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000016521	-	6341	XM_006635459	ENSLOCP00000016491	1931 (aa)	XP_015211684	W5N782
ENSLOCT00000016525	-	6086	-	ENSLOCP00000016495	1846 (aa)	-	W5N786

Gene Model

Click here to download ENSLOCG00000013377's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000013377's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000013377	tnrc6c1	93	52.643	ENSLOCG00000005517	tnrc6a	79	53.066