EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000013402 (Gene tree)
Gene ID: 102696117
Gene Symbol: pcbp4
Alias: wu:fc68f03|zgc:65870|zgc:77347
Full Name: poly(rC)-binding protein 4-like
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 58371 bases
Position: chrLG5:43082277-43140647
Accession: 102696117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000016526	KH_1	PF00013.29	3.4e-51	1	3
ENSLOCP00000016526	KH_1	PF00013.29	3.4e-51	2	3
ENSLOCP00000016526	KH_1	PF00013.29	3.4e-51	3	3
ENSLOCP00000016526	KH_2	PF07650.17	6.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000016556	-	4570	XM_006630963	ENSLOCP00000016526	453 (aa)	XP_015203392	W5N7B7

Gene Model

Click here to download ENSLOCG00000013402's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000013402's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000013402	pcbp4	98	57.708	ENSLOCG00000005058	zgc:110045	100	57.708
ENSLOCG00000013402	pcbp4	69	32.184	ENSLOCG00000011599	igf2bp3	60	31.111
ENSLOCG00000013402	pcbp4	73	66.864	ENSLOCG00000009369	pcbp3	97	66.864
ENSLOCG00000013402	pcbp4	57	43.333	ENSLOCG00000002262	hnrpkl	57	43.333
ENSLOCG00000013402	pcbp4	97	54.486	ENSLOCG00000005598	pcbp2	86	58.663
ENSLOCG00000013402	pcbp4	53	37.500	ENSLOCG00000003745	fubp1	53	36.585