EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000013497 (Gene tree)
Gene ID: 102692233
Gene Symbol: igf2bp1
Alias: fb96d05|wu:fb18f03|wu:fb96d05|wu:fi72a06|zgc:152963
Full Name: insulin like growth factor 2 mRNA binding protein 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 50745 bases
Position: chrLG15:9412283-9463027
Accession: 102692233
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000016647	KH_1	PF00013.29	5.1e-57	1	4
ENSLOCP00000016647	KH_1	PF00013.29	5.1e-57	2	4
ENSLOCP00000016647	KH_1	PF00013.29	5.1e-57	3	4
ENSLOCP00000016647	KH_1	PF00013.29	5.1e-57	4	4
ENSLOCP00000016647	RRM_1	PF00076.22	2.7e-17	1	2
ENSLOCP00000016647	RRM_1	PF00076.22	2.7e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000016677	-	6846	XM_006638360	ENSLOCP00000016647	601 (aa)	XP_006638423	W5N7N8

Gene Model

Click here to download ENSLOCG00000013497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000013497's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000013497	igf2bp1	62	31.325	ENSLOCG00000006229	khsrp	59	31.325
ENSLOCG00000013497	igf2bp1	97	75.472	ENSLOCG00000011599	igf2bp3	96	73.765
ENSLOCG00000013497	igf2bp1	57	34.307	ENSLOCG00000005598	pcbp2	65	34.307
ENSLOCG00000013497	igf2bp1	96	68.937	ENSLOCG00000009564	igf2bp2b	97	69.309
ENSLOCG00000013497	igf2bp1	57	34.307	ENSLOCG00000005058	zgc:110045	79	34.307