EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000013596 (Gene tree)
Gene ID: 102695202
Gene Symbol: zgc:163098
Alias: -
Full Name: U2 snRNP-associated SURP motif-containing protein-like
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 22768 bases
Position: chrLG7:20352291-20375058
Accession: 102695202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000016765	cwf21	PF08312.12	3.3e-09	1	1
ENSLOCP00000016774	cwf21	PF08312.12	3.9e-09	1	1
ENSLOCP00000016765	RRM_1	PF00076.22	1.5e-12	1	1
ENSLOCP00000016774	RRM_1	PF00076.22	2.7e-10	1	1
ENSLOCP00000016765	Surp	PF01805.20	4.9e-19	1	1
ENSLOCP00000016774	Surp	PF01805.20	6.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000016795	-	3112	XM_006632639	ENSLOCP00000016765	825 (aa)	XP_015206559	W5N806
ENSLOCT00000016804	-	2961	-	ENSLOCP00000016774	949 (aa)	-	W5N815

Gene Model

Click here to download ENSLOCG00000013596's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000013596's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000013596	zgc:163098	82	60.489	ENSLOCG00000007828	u2surp	85	54.093