EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000013629 (Gene tree)
Gene ID: 102684395
Gene Symbol: sltm
Alias: wu:fd12b08|zgc:65985
Full Name: SAFB like transcription modulator
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 14465 bases
Position: chrLG3:41755461-41769925
Accession: 102684395
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000016815	RRM_5	PF13893.6	1e-07	1	1
ENSLOCP00000016811	RRM_5	PF13893.6	1.1e-07	1	1
ENSLOCP00000016815	RRM_1	PF00076.22	5.1e-12	1	1
ENSLOCP00000016811	RRM_1	PF00076.22	5.2e-12	1	1
ENSLOCP00000016815	SAP	PF02037.27	1.1e-10	1	1
ENSLOCP00000016811	SAP	PF02037.27	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000016845	-	2921	XM_006628787	ENSLOCP00000016815	956 (aa)	XP_015198674	W5N856
ENSLOCT00000016841	-	3086	-	ENSLOCP00000016811	1018 (aa)	-	W5N852

Gene Model

Click here to download ENSLOCG00000013629's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000013629's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000013629	sltm	69	50.000	ENSLOCG00000003613	safb	57	51.190