EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000013909 (Gene tree)
Gene ID: 102692187
Gene Symbol: hdlbpb
Alias: fa07b03|sb:eu532|si:dkey-38p12.2|wu:fa07b03
Full Name: vigilin-like
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 20229 bases
Position: chrLG2:60802829-60823057
Accession: 102692187
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000017166	KH_1	PF00013.29	9.3e-176	1	13
ENSLOCP00000017166	KH_1	PF00013.29	9.3e-176	2	13
ENSLOCP00000017166	KH_1	PF00013.29	9.3e-176	3	13
ENSLOCP00000017166	KH_1	PF00013.29	9.3e-176	4	13
ENSLOCP00000017166	KH_1	PF00013.29	9.3e-176	5	13
ENSLOCP00000017166	KH_1	PF00013.29	9.3e-176	6	13
ENSLOCP00000017166	KH_1	PF00013.29	9.3e-176	7	13
ENSLOCP00000017166	KH_1	PF00013.29	9.3e-176	8	13
ENSLOCP00000017166	KH_1	PF00013.29	9.3e-176	9	13
ENSLOCP00000017166	KH_1	PF00013.29	9.3e-176	10	13
ENSLOCP00000017166	KH_1	PF00013.29	9.3e-176	11	13
ENSLOCP00000017166	KH_1	PF00013.29	9.3e-176	12	13
ENSLOCP00000017166	KH_1	PF00013.29	9.3e-176	13	13

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000017197	-	5190	XM_006627480	ENSLOCP00000017166	1229 (aa)	-	W5N957

Gene Model

Click here to download ENSLOCG00000013909's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000013909's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000013909	hdlbpb	100	72.877	ENSLOCG00000006278	hdlbpa	100	72.877