EuRBPDB

Description

Ensembl ID: ENSLOCG00000013957 (Gene tree)
Gene ID: 102685396
Gene Symbol: zfp36l1a
Alias: cb198|cb480|fk89d11|id:ibd1247|sb:cb198|sb:cb480|wu:fb80h11|wu:fb92f07|wu:fk89d11|zfp36l1|zfp36l2|zgc:153979
Full Name: ZFP36 ring finger protein like 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 7011 bases
Position: chrLG7:30986313-30993323
Accession: 102685396
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000017206	zf-CCCH	PF00642.24	1.7e-22	1	2
ENSLOCP00000017206	zf-CCCH	PF00642.24	1.7e-22	2	2
ENSLOCP00000017209	zf-CCCH	PF00642.24	1.8e-22	1	2
ENSLOCP00000017209	zf-CCCH	PF00642.24	1.8e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000017237	-	4694	XM_006632666	ENSLOCP00000017206	357 (aa)	XP_006632729	W5N997
ENSLOCT00000017240	-	1077	-	ENSLOCP00000017209	358 (aa)	-	W5N9A0

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000013957	zfp36l1a	85	37.887	ENSLOCG00000014587	sb:cb81	94	39.175
ENSLOCG00000013957	zfp36l1a	100	42.986	ENSLOCG00000016446	-	90	46.272