EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000014144 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 1479 bases
Position: chrLG2:61799510-61800988
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000017424	zf-C2H2	PF00096.26	2.3e-74	1	13
ENSLOCP00000017424	zf-C2H2	PF00096.26	2.3e-74	2	13
ENSLOCP00000017424	zf-C2H2	PF00096.26	2.3e-74	3	13
ENSLOCP00000017424	zf-C2H2	PF00096.26	2.3e-74	4	13
ENSLOCP00000017424	zf-C2H2	PF00096.26	2.3e-74	5	13
ENSLOCP00000017424	zf-C2H2	PF00096.26	2.3e-74	6	13
ENSLOCP00000017424	zf-C2H2	PF00096.26	2.3e-74	7	13
ENSLOCP00000017424	zf-C2H2	PF00096.26	2.3e-74	8	13
ENSLOCP00000017424	zf-C2H2	PF00096.26	2.3e-74	9	13
ENSLOCP00000017424	zf-C2H2	PF00096.26	2.3e-74	10	13
ENSLOCP00000017424	zf-C2H2	PF00096.26	2.3e-74	11	13
ENSLOCP00000017424	zf-C2H2	PF00096.26	2.3e-74	12	13
ENSLOCP00000017424	zf-C2H2	PF00096.26	2.3e-74	13	13
ENSLOCP00000017424	zf-met	PF12874.7	5.5e-06	1	2
ENSLOCP00000017424	zf-met	PF12874.7	5.5e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000017455	-	1434	-	ENSLOCP00000017424	478 (aa)	-	W5N9W5

Gene Model

Click here to download ENSLOCG00000014144's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000014144's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000014144	-	99	36.719	ENSLOCG00000005992	SNAI2	57	40.541
ENSLOCG00000014144	-	100	45.714	ENSLOCG00000003926	znf236	71	45.714
ENSLOCG00000014144	-	99	36.567	ENSLOCG00000004887	SNAI3	88	39.474
ENSLOCG00000014144	-	99	53.061	ENSLOCG00000007831	sall3a	61	48.000
ENSLOCG00000014144	-	100	56.881	ENSLOCG00000018285	-	100	56.881
ENSLOCG00000014144	-	100	46.104	ENSLOCG00000017736	znf648	72	46.104
ENSLOCG00000014144	-	100	40.404	ENSLOCG00000004208	-	99	40.404
ENSLOCG00000014144	-	99	34.921	ENSLOCG00000009778	prdm5	76	33.824
ENSLOCG00000014144	-	99	43.612	ENSLOCG00000016466	-	98	38.940
ENSLOCG00000014144	-	100	46.711	ENSLOCG00000000714	-	90	46.711
ENSLOCG00000014144	-	99	45.608	ENSLOCG00000014366	-	90	50.943
ENSLOCG00000014144	-	99	48.438	ENSLOCG00000017422	-	79	48.438
ENSLOCG00000014144	-	99	44.444	ENSLOCG00000009974	zbtb49	66	44.444
ENSLOCG00000014144	-	99	38.298	ENSLOCG00000004443	snai1a	74	38.298
ENSLOCG00000014144	-	100	40.248	ENSLOCG00000017864	-	100	40.248
ENSLOCG00000014144	-	100	43.060	ENSLOCG00000004661	-	99	42.264
ENSLOCG00000014144	-	100	33.756	ENSLOCG00000003678	znf319b	89	33.756
ENSLOCG00000014144	-	100	33.756	ENSLOCG00000000544	znf319b	89	33.756
ENSLOCG00000014144	-	99	35.200	ENSLOCG00000007573	scrt1b	51	35.200
ENSLOCG00000014144	-	100	39.865	ENSLOCG00000007968	znf384l	50	39.865
ENSLOCG00000014144	-	100	40.000	ENSLOCG00000005750	gfi1b	55	40.000
ENSLOCG00000014144	-	99	46.939	ENSLOCG00000007283	sall1b	59	46.939