EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000014366 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 25292 bases
Position: chrLG1:404837-430128
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000017692	zf-C2H2	PF00096.26	2.3e-41	1	6
ENSLOCP00000017692	zf-C2H2	PF00096.26	2.3e-41	2	6
ENSLOCP00000017692	zf-C2H2	PF00096.26	2.3e-41	3	6
ENSLOCP00000017692	zf-C2H2	PF00096.26	2.3e-41	4	6
ENSLOCP00000017692	zf-C2H2	PF00096.26	2.3e-41	5	6
ENSLOCP00000017692	zf-C2H2	PF00096.26	2.3e-41	6	6
ENSLOCP00000017689	zf-C2H2	PF00096.26	8.7e-35	1	5
ENSLOCP00000017689	zf-C2H2	PF00096.26	8.7e-35	2	5
ENSLOCP00000017689	zf-C2H2	PF00096.26	8.7e-35	3	5
ENSLOCP00000017689	zf-C2H2	PF00096.26	8.7e-35	4	5
ENSLOCP00000017689	zf-C2H2	PF00096.26	8.7e-35	5	5
ENSLOCP00000017692	zf-met	PF12874.7	3.7e-12	1	2
ENSLOCP00000017692	zf-met	PF12874.7	3.7e-12	2	2
ENSLOCP00000017689	zf-met	PF12874.7	4.8e-07	1	2
ENSLOCP00000017689	zf-met	PF12874.7	4.8e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000017721	-	996	-	ENSLOCP00000017689	332 (aa)	-	W5NAN0
ENSLOCT00000017724	-	996	-	ENSLOCP00000017692	332 (aa)	-	W5NAN3

Gene Model

Click here to download ENSLOCG00000014366's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000014366's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000014366	-	84	39.113	ENSLOCG00000017736	znf648	74	39.113
ENSLOCG00000014366	-	90	45.098	ENSLOCG00000004661	-	99	45.098
ENSLOCG00000014366	-	97	36.000	ENSLOCG00000004208	-	99	36.000
ENSLOCG00000014366	-	99	41.463	ENSLOCG00000009778	prdm5	75	41.463
ENSLOCG00000014366	-	94	40.625	ENSLOCG00000017422	-	69	43.478
ENSLOCG00000014366	-	95	40.000	ENSLOCG00000003926	znf236	76	37.349
ENSLOCG00000014366	-	97	36.620	ENSLOCG00000004443	snai1a	60	37.419
ENSLOCG00000014366	-	92	47.541	ENSLOCG00000017864	-	99	50.450
ENSLOCG00000014366	-	100	35.714	ENSLOCG00000003238	si:dkey-89b17.4	96	36.145
ENSLOCG00000014366	-	94	44.444	ENSLOCG00000009974	zbtb49	53	45.625
ENSLOCG00000014366	-	92	45.570	ENSLOCG00000004887	SNAI3	87	45.570
ENSLOCG00000014366	-	94	42.177	ENSLOCG00000005750	gfi1b	52	42.177
ENSLOCG00000014366	-	93	51.376	ENSLOCG00000018285	-	100	51.376
ENSLOCG00000014366	-	94	39.007	ENSLOCG00000007573	scrt1b	55	39.007
ENSLOCG00000014366	-	96	42.395	ENSLOCG00000000714	-	90	42.395
ENSLOCG00000014366	-	99	41.573	ENSLOCG00000003678	znf319b	88	41.573
ENSLOCG00000014366	-	99	40.541	ENSLOCG00000016466	-	98	40.571
ENSLOCG00000014366	-	93	31.452	ENSLOCG00000005402	plag1	53	31.452
ENSLOCG00000014366	-	92	46.914	ENSLOCG00000005992	SNAI2	59	46.914
ENSLOCG00000014366	-	99	41.573	ENSLOCG00000000544	znf319b	88	41.573
ENSLOCG00000014366	-	96	32.103	ENSLOCG00000000947	znf341	50	34.815
ENSLOCG00000014366	-	90	50.943	ENSLOCG00000014144	-	99	45.608