EuRBPDB

Description

Ensembl ID: ENSLOCG00000014465 (Gene tree)
Gene ID: 102694465
Gene Symbol: eif4a1b
Alias: eif4a1|fb49a04|im:7143023|wu:fb20a10|wu:fb49a04|wu:fc76a02|wu:fc96c01|wu:fd15g03
Full Name: eukaryotic translation initiation factor 4A1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 10259 bases
Position: chrLG2:63691910-63702168
Accession: 102694465
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000017804	ResIII	PF04851.15	6.2e-07	1	1
ENSLOCP00000017808	ResIII	PF04851.15	6.4e-07	1	1
ENSLOCP00000017804	DEAD	PF00270.29	1.7e-44	1	1
ENSLOCP00000017808	DEAD	PF00270.29	1.8e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000017840	-	1454	-	ENSLOCP00000017808	411 (aa)	-	W5NAZ9
ENSLOCT00000017836	-	1875	XM_006627562	ENSLOCP00000017804	406 (aa)	XP_006627625	W5NAZ5

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000014465	eif4a1b	93	70.635	ENSLOCG00000015796	eif4a3	92	70.635
ENSLOCG00000014465	eif4a1b	72	45.263	ENSLOCG00000004352	ddx61	70	45.263
ENSLOCG00000014465	eif4a1b	95	36.802	ENSLOCG00000006534	DDX39A	94	36.881
ENSLOCG00000014465	eif4a1b	91	31.300	ENSLOCG00000002659	ddx27	50	31.202
ENSLOCG00000014465	eif4a1b	83	35.569	ENSLOCG00000016170	ddx43	51	35.569
ENSLOCG00000014465	eif4a1b	91	40.263	ENSLOCG00000002118	ddx19	77	40.263
ENSLOCG00000014465	eif4a1b	92	32.031	ENSLOCG00000002119	ddx49	79	32.031
ENSLOCG00000014465	eif4a1b	92	30.769	ENSLOCG00000002122	ddx3xa	59	30.404
ENSLOCG00000014465	eif4a1b	91	38.606	ENSLOCG00000000770	ddx6	76	38.606
ENSLOCG00000014465	eif4a1b	87	32.597	ENSLOCG00000013534	ddx5	58	32.597
ENSLOCG00000014465	eif4a1b	99	91.892	ENSLOCG00000000847	eif4a2	99	91.892
ENSLOCG00000014465	eif4a1b	91	31.948	ENSLOCG00000011956	DDX41	62	32.208