EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000014692 (Gene tree)
Gene ID: 102684782
Gene Symbol: zgc:171927
Alias: -
Full Name: ras-related protein ORAB-1-like
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 3019 bases
Position: chrLG2:66582138-66585156
Accession: 102684782
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000018084	MMR_HSR1	PF01926.23	5.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000018116	-	642	XM_006627600	ENSLOCP00000018084	213 (aa)	XP_006627663	W5NBS5

Gene Model

Click here to download ENSLOCG00000014692's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000014692's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000014692	zgc:171927	78	39.080	ENSLOCG00000017414	rab9a	87	39.080
ENSLOCG00000014692	zgc:171927	73	45.806	ENSLOCG00000008881	rab25a	90	45.806
ENSLOCG00000014692	zgc:171927	83	48.023	ENSLOCG00000002680	rab12	79	45.178
ENSLOCG00000014692	zgc:171927	79	43.931	ENSLOCG00000015358	rab33a	72	43.931
ENSLOCG00000014692	zgc:171927	85	35.484	ENSLOCG00000016767	rabl2	81	35.484
ENSLOCG00000014692	zgc:171927	68	42.857	ENSLOCG00000002825	rab36	64	42.857
ENSLOCG00000014692	zgc:171927	82	47.191	ENSLOCG00000012406	rab15	83	47.191
ENSLOCG00000014692	zgc:171927	77	40.588	ENSLOCG00000015576	zgc:100918	82	40.588
ENSLOCG00000014692	zgc:171927	55	32.258	ENSLOCG00000001677	arfrp1	59	32.258
ENSLOCG00000014692	zgc:171927	75	38.650	ENSLOCG00000001886	mras	77	38.650
ENSLOCG00000014692	zgc:171927	73	36.875	ENSLOCG00000014749	si:dkey-13a21.4	78	36.875
ENSLOCG00000014692	zgc:171927	84	48.876	ENSLOCG00000013835	rab11a	81	48.876
ENSLOCG00000014692	zgc:171927	84	44.944	ENSLOCG00000006591	rab5ab	81	44.944
ENSLOCG00000014692	zgc:171927	58	30.400	ENSLOCG00000018349	arl4aa	62	30.400
ENSLOCG00000014692	zgc:171927	55	33.051	ENSLOCG00000012467	arl8a	61	33.051
ENSLOCG00000014692	zgc:171927	79	32.558	ENSLOCG00000016464	si:cabz01085950.1	84	32.558
ENSLOCG00000014692	zgc:171927	97	75.728	ENSLOCG00000016037	rab1ab	97	75.728
ENSLOCG00000014692	zgc:171927	84	39.779	ENSLOCG00000005802	rab34a	67	39.779
ENSLOCG00000014692	zgc:171927	77	53.374	ENSLOCG00000005884	rab30	80	53.374
ENSLOCG00000014692	zgc:171927	78	47.929	ENSLOCG00000006748	-	79	47.929
ENSLOCG00000014692	zgc:171927	78	48.503	ENSLOCG00000005108	rab2a	98	43.269
ENSLOCG00000014692	zgc:171927	87	38.579	ENSLOCG00000003467	si:dkey-34d22.5	95	37.561
ENSLOCG00000014692	zgc:171927	95	36.232	ENSLOCG00000017482	rab9b	97	36.232
ENSLOCG00000014692	zgc:171927	85	36.364	ENSLOCG00000018352	rab9b	92	36.364
ENSLOCG00000014692	zgc:171927	94	38.806	ENSLOCG00000015191	rab41	92	38.806
ENSLOCG00000014692	zgc:171927	95	41.063	ENSLOCG00000012566	rab5c	90	41.063
ENSLOCG00000014692	zgc:171927	77	30.286	ENSLOCG00000014424	rasl11a	69	30.286
ENSLOCG00000014692	zgc:171927	77	41.176	ENSLOCG00000014547	RAB7A	81	41.176
ENSLOCG00000014692	zgc:171927	95	35.644	ENSLOCG00000007029	rab22a	97	35.644
ENSLOCG00000014692	zgc:171927	55	31.356	ENSLOCG00000010957	arl8bb	61	31.356
ENSLOCG00000014692	zgc:171927	74	66.879	ENSLOCG00000001637	rab35b	76	66.879
ENSLOCG00000014692	zgc:171927	81	30.220	ENSLOCG00000014119	rasl11b	74	30.220
ENSLOCG00000014692	zgc:171927	90	41.146	ENSLOCG00000005509	rab14	88	41.146
ENSLOCG00000014692	zgc:171927	69	37.671	ENSLOCG00000016999	rab23	68	36.364
ENSLOCG00000014692	zgc:171927	79	45.087	ENSLOCG00000005904	zgc:101559	74	45.087
ENSLOCG00000014692	zgc:171927	77	37.195	ENSLOCG00000015334	kras	94	35.754
ENSLOCG00000014692	zgc:171927	85	32.044	ENSLOCG00000010004	rheb	96	32.044
ENSLOCG00000014692	zgc:171927	88	31.915	ENSLOCG00000007682	rhebl1	100	31.915
ENSLOCG00000014692	zgc:171927	72	52.903	ENSLOCG00000007491	rab18a	75	52.903
ENSLOCG00000014692	zgc:171927	77	39.157	ENSLOCG00000015825	-	78	39.157
ENSLOCG00000014692	zgc:171927	79	45.977	ENSLOCG00000014927	rab39bb	80	45.977
ENSLOCG00000014692	zgc:171927	96	44.660	ENSLOCG00000008865	rab11al	95	44.660
ENSLOCG00000014692	zgc:171927	72	32.911	ENSLOCG00000016679	dnajc27	58	32.911
ENSLOCG00000014692	zgc:171927	83	41.989	ENSLOCG00000010535	rab33ba	77	41.989
ENSLOCG00000014692	zgc:171927	60	30.233	ENSLOCG00000017515	arl4d	64	30.233
ENSLOCG00000014692	zgc:171927	96	38.605	ENSLOCG00000003453	rab42a	97	38.605
ENSLOCG00000014692	zgc:171927	77	37.805	ENSLOCG00000000684	hrasb	86	37.576
ENSLOCG00000014692	zgc:171927	76	30.303	ENSLOCG00000017761	rasd4	78	30.303
ENSLOCG00000014692	zgc:171927	76	37.423	ENSLOCG00000010440	nras	85	37.423