EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000014749 (Gene tree)
Gene ID: 102698928
Gene Symbol: si:dkey-13a21.4
Alias: zgc:110195
Full Name: ras-related protein Rab-7a-like
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 5463 bases
Position: chrLG1:2758410-2763872
Accession: 102698928
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000018160	MMR_HSR1	PF01926.23	3.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000018192	-	1206	XM_006625435	ENSLOCP00000018160	205 (aa)	XP_015204188	W5NC01

Gene Model

Click here to download ENSLOCG00000014749's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000014749's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000014749	si:dkey-13a21.4	84	34.682	ENSLOCG00000005509	rab14	79	34.682
ENSLOCG00000014749	si:dkey-13a21.4	97	34.328	ENSLOCG00000015191	rab41	93	34.328
ENSLOCG00000014749	si:dkey-13a21.4	80	38.182	ENSLOCG00000016999	rab23	72	38.418
ENSLOCG00000014749	si:dkey-13a21.4	80	36.145	ENSLOCG00000016037	rab1ab	79	36.145
ENSLOCG00000014749	si:dkey-13a21.4	85	62.286	ENSLOCG00000014547	RAB7A	84	62.286
ENSLOCG00000014749	si:dkey-13a21.4	77	34.356	ENSLOCG00000015358	rab33a	66	34.356
ENSLOCG00000014749	si:dkey-13a21.4	96	31.188	ENSLOCG00000005904	zgc:101559	84	31.188
ENSLOCG00000014749	si:dkey-13a21.4	97	31.100	ENSLOCG00000006748	-	97	31.100
ENSLOCG00000014749	si:dkey-13a21.4	100	56.311	ENSLOCG00000015576	zgc:100918	100	56.311
ENSLOCG00000014749	si:dkey-13a21.4	79	30.435	ENSLOCG00000017737	-	80	30.435
ENSLOCG00000014749	si:dkey-13a21.4	83	34.302	ENSLOCG00000003467	si:dkey-34d22.5	75	36.364
ENSLOCG00000014749	si:dkey-13a21.4	83	34.302	ENSLOCG00000014927	rab39bb	78	34.302
ENSLOCG00000014749	si:dkey-13a21.4	97	33.824	ENSLOCG00000012566	rab5c	90	33.824
ENSLOCG00000014749	si:dkey-13a21.4	90	30.978	ENSLOCG00000015334	kras	94	31.282
ENSLOCG00000014749	si:dkey-13a21.4	82	32.143	ENSLOCG00000016767	rabl2	71	32.143
ENSLOCG00000014749	si:dkey-13a21.4	74	35.714	ENSLOCG00000002825	rab36	66	35.714
ENSLOCG00000014749	si:dkey-13a21.4	80	53.012	ENSLOCG00000017482	rab9b	82	53.012
ENSLOCG00000014749	si:dkey-13a21.4	81	34.911	ENSLOCG00000002680	rab12	67	34.503
ENSLOCG00000014749	si:dkey-13a21.4	97	31.250	ENSLOCG00000003453	rab42a	97	31.250
ENSLOCG00000014749	si:dkey-13a21.4	73	32.000	ENSLOCG00000000684	hrasb	83	32.298
ENSLOCG00000014749	si:dkey-13a21.4	86	36.957	ENSLOCG00000005884	rab30	89	36.957
ENSLOCG00000014749	si:dkey-13a21.4	90	32.105	ENSLOCG00000015825	-	86	32.105
ENSLOCG00000014749	si:dkey-13a21.4	77	30.247	ENSLOCG00000014119	rasl11b	67	30.247
ENSLOCG00000014749	si:dkey-13a21.4	77	36.250	ENSLOCG00000005802	rab34a	59	36.250
ENSLOCG00000014749	si:dkey-13a21.4	80	37.195	ENSLOCG00000006591	rab5ab	74	37.195
ENSLOCG00000014749	si:dkey-13a21.4	75	36.774	ENSLOCG00000010535	rab33ba	66	36.774
ENSLOCG00000014749	si:dkey-13a21.4	77	34.375	ENSLOCG00000016679	dnajc27	59	34.375
ENSLOCG00000014749	si:dkey-13a21.4	76	35.897	ENSLOCG00000008881	rab25a	88	35.897
ENSLOCG00000014749	si:dkey-13a21.4	77	38.608	ENSLOCG00000001637	rab35b	75	38.608
ENSLOCG00000014749	si:dkey-13a21.4	78	39.375	ENSLOCG00000007029	rab22a	80	39.375
ENSLOCG00000014749	si:dkey-13a21.4	80	53.012	ENSLOCG00000018352	rab9b	82	53.012
ENSLOCG00000014749	si:dkey-13a21.4	76	35.669	ENSLOCG00000013835	rab11a	70	35.669
ENSLOCG00000014749	si:dkey-13a21.4	80	32.934	ENSLOCG00000001886	mras	78	32.934
ENSLOCG00000014749	si:dkey-13a21.4	78	36.875	ENSLOCG00000014692	zgc:171927	73	36.875
ENSLOCG00000014749	si:dkey-13a21.4	76	35.032	ENSLOCG00000008865	rab11al	71	35.032
ENSLOCG00000014749	si:dkey-13a21.4	82	32.941	ENSLOCG00000012406	rab15	78	32.941
ENSLOCG00000014749	si:dkey-13a21.4	79	34.969	ENSLOCG00000005108	rab2a	75	34.969
ENSLOCG00000014749	si:dkey-13a21.4	89	35.519	ENSLOCG00000007491	rab18a	93	35.385
ENSLOCG00000014749	si:dkey-13a21.4	76	33.548	ENSLOCG00000010440	nras	86	33.735
ENSLOCG00000014749	si:dkey-13a21.4	96	45.960	ENSLOCG00000017414	rab9a	96	45.960
ENSLOCG00000014749	si:dkey-13a21.4	75	33.962	ENSLOCG00000007682	rhebl1	82	33.962