EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000014804 (Gene tree)
Gene ID: 102687130
Gene Symbol: nova2
Alias: id:ibd1128|sb:cb364
Full Name: RNA-binding protein Nova-1-like
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 46233 bases
Position: chrLG2:67508177-67554409
Accession: 102687130
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000018231	KH_1	PF00013.29	1.8e-45	1	3
ENSLOCP00000018231	KH_1	PF00013.29	1.8e-45	2	3
ENSLOCP00000018231	KH_1	PF00013.29	1.8e-45	3	3
ENSLOCP00000018230	KH_1	PF00013.29	2.1e-45	1	3
ENSLOCP00000018230	KH_1	PF00013.29	2.1e-45	2	3
ENSLOCP00000018230	KH_1	PF00013.29	2.1e-45	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000018263	-	2318	XM_006627613	ENSLOCP00000018231	498 (aa)	XP_006627676	W5NC72
ENSLOCT00000018262	-	2387	-	ENSLOCP00000018230	519 (aa)	-	W5NC71

Gene Model

Click here to download ENSLOCG00000014804's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000014804's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000014804	nova2	52	37.500	ENSLOCG00000002262	hnrpkl	56	37.500
ENSLOCG00000014804	nova2	52	42.188	ENSLOCG00000005598	pcbp2	66	42.188
ENSLOCG00000014804	nova2	99	71.346	ENSLOCG00000009727	NOVA1	100	75.253
ENSLOCG00000014804	nova2	89	30.208	ENSLOCG00000009564	igf2bp2b	54	31.414
ENSLOCG00000014804	nova2	86	31.390	ENSLOCG00000009369	pcbp3	94	33.140