EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000015141 (Gene tree)
Gene ID: 102698883
Gene Symbol: si:dkey-205h23.2
Alias: -
Full Name: CUGBP Elav-like family member 6
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 131250 bases
Position: chrLG3:56451191-56582440
Accession: 102698883
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000018635	RRM_1	PF00076.22	6.3e-38	1	2
ENSLOCP00000018635	RRM_1	PF00076.22	6.3e-38	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000018667	-	1822	XM_006628952	ENSLOCP00000018635	380 (aa)	XP_006629015	W5NDC6

Gene Model

Click here to download ENSLOCG00000015141's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000015141's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000015141	si:dkey-205h23.2	58	66.667	ENSLOCG00000005966	celf1	91	43.720
ENSLOCG00000015141	si:dkey-205h23.2	100	73.282	ENSLOCG00000006518	celf3b	99	72.265
ENSLOCG00000015141	si:dkey-205h23.2	54	40.698	ENSLOCG00000007647	elavl3	74	40.698
ENSLOCG00000015141	si:dkey-205h23.2	100	69.133	ENSLOCG00000005481	celf5a	100	68.734
ENSLOCG00000015141	si:dkey-205h23.2	100	48.293	ENSLOCG00000015690	celf2	90	46.394
ENSLOCG00000015141	si:dkey-205h23.2	71	36.782	ENSLOCG00000012575	ELAVL2	64	40.741
ENSLOCG00000015141	si:dkey-205h23.2	98	67.229	ENSLOCG00000004792	celf4	98	66.425
ENSLOCG00000015141	si:dkey-205h23.2	68	36.508	ENSLOCG00000009363	elavl4	61	39.506