EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000015198 (Gene tree)
Gene ID: 102694525
Gene Symbol: snrnp200
Alias: fb63a09|si:ch211-251j10.5|wu:fb63a09
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 26688 bases
Position: chrLG1:7910075-7936762
Accession: 102694525
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000018708	ResIII	PF04851.15	1e-26	1	2
ENSLOCP00000018708	ResIII	PF04851.15	1e-26	2	2
ENSLOCP00000018708	DEAD	PF00270.29	6.3e-54	1	2
ENSLOCP00000018708	DEAD	PF00270.29	6.3e-54	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000018740	-	7921	XM_006625327	ENSLOCP00000018708	2138 (aa)	XP_006625390	W5NDJ9

Gene Model

Click here to download ENSLOCG00000015198's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000015198's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000015198	snrnp200	75	30.274	ENSLOCG00000004931	hfm1	80	30.274
ENSLOCG00000015198	snrnp200	94	40.717	ENSLOCG00000016550	ascc3	89	42.547