EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000015233 (Gene tree)
Gene ID: 102696057
Gene Symbol: sept6
Alias: fc54b04|wu:fb70g05|wu:fc54b04|wu:fl76c07|zgc:66071
Full Name: septin 6
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 19481 bases
Position: chrLG7:47238949-47258429
Accession: 102696057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000018746	MMR_HSR1	PF01926.23	1.8e-05	1	1
ENSLOCP00000018747	MMR_HSR1	PF01926.23	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000018779	-	1311	XM_006632898	ENSLOCP00000018747	437 (aa)	XP_006632961	W5NDN8
ENSLOCT00000018778	-	1251	-	ENSLOCP00000018746	400 (aa)	-	W5NDN7

Gene Model

Click here to download ENSLOCG00000015233's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000015233's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000015233	sept6	69	42.403	ENSLOCG00000013371	sept9a	50	42.268
ENSLOCG00000015233	sept6	99	79.500	ENSLOCG00000010651	sept8a	89	78.089
ENSLOCG00000015233	sept6	99	38.821	ENSLOCG00000006999	sept7b	79	41.813
ENSLOCG00000015233	sept6	80	40.413	ENSLOCG00000006303	sept2	91	40.525
ENSLOCG00000015233	sept6	99	37.931	ENSLOCG00000003765	sept15	79	40.000
ENSLOCG00000015233	sept6	80	41.212	ENSLOCG00000001793	zgc:63587	97	40.588