EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
ENSLOCG00000015238 (Gene tree)
Gene ID
102685249
Gene Symbol
upf3b
Alias
zgc:174674|zgc:66390
Full Name
UPF3B%2C regulator of nonsense mediated mRNA decay
Gene Type
protein_coding
Species
Lepisosteus_oculatus
Status
putative
Strand
Minus strand
Length
8780 bases
Position
chrLG7:47270858-47279637
Accession
102685249
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLOCP00000018750Smg4_UPF3PF03467.151e-5311
ENSLOCP00000018751Smg4_UPF3PF03467.159.9e-5211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLOCT00000018782-3468XM_006633015ENSLOCP00000018750441 (aa)XP_006633078W5NDP1
ENSLOCT00000018783-2296-ENSLOCP00000018751452 (aa)-W5NDP2
Gene Model
Click here to download ENSLOCG00000015238's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000015238's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLOCG00000015238upf3b8952.580ENSLOCG00000002665upf3a5669.030

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