EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000015324 (Gene tree)
Gene ID: 102698667
Gene Symbol: tia1l
Alias: fb98f09|wu:fb98f09|zgc:76917
Full Name: TIA1 cytotoxic granule associated RNA binding protein
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 14663 bases
Position: chrLG1:9152662-9167324
Accession: 102698667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000018857	RRM_1	PF00076.22	4.2e-66	1	3
ENSLOCP00000018857	RRM_1	PF00076.22	4.2e-66	2	3
ENSLOCP00000018857	RRM_1	PF00076.22	4.2e-66	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000018889	-	2865	XM_006625353	ENSLOCP00000018857	380 (aa)	XP_015193092	W5NDZ8

Gene Model

Click here to download ENSLOCG00000015324's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000015324's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000015324	tia1l	71	35.897	ENSLOCG00000009363	elavl4	79	35.897
ENSLOCG00000015324	tia1l	71	37.179	ENSLOCG00000007647	elavl3	90	37.179
ENSLOCG00000015324	tia1l	72	31.522	ENSLOCG00000009681	PABPC1	58	31.522
ENSLOCG00000015324	tia1l	72	30.000	ENSLOCG00000001877	pabpc4	57	30.000
ENSLOCG00000015324	tia1l	74	34.524	ENSLOCG00000016919	syncripl	54	34.524
ENSLOCG00000015324	tia1l	72	31.183	ENSLOCG00000007519	pabpc1l	58	31.183
ENSLOCG00000015324	tia1l	71	34.615	ENSLOCG00000012575	ELAVL2	87	34.615
ENSLOCG00000015324	tia1l	100	72.705	ENSLOCG00000011405	tial1	89	72.771