EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000015397 (Gene tree)
Gene ID: 102684534
Gene Symbol: fmr1
Alias: zFMR1
Full Name: fragile X mental retardation 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 13698 bases
Position: chrLG7:50167058-50180755
Accession: 102684534
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000018950	KH_1	PF00013.29	1.7e-15	1	2
ENSLOCP00000018950	KH_1	PF00013.29	1.7e-15	2	2
ENSLOCP00000018950	Agenet	PF05641.12	3.5e-13	1	1
ENSLOCP00000018950	FXMRP1_C_core	PF12235.8	1.2e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000018982	-	2633	XM_006632927	ENSLOCP00000018950	614 (aa)	XP_006632990	W5NE91

Gene Model

Click here to download ENSLOCG00000015397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000015397's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000015397	fmr1	78	40.755	ENSLOCG00000013240	fxr2	67	40.514
ENSLOCG00000015397	fmr1	82	63.189	ENSLOCG00000000589	fxr1	68	63.492