EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000015435 (Gene tree)
Gene ID: 102683157
Gene Symbol: zmat4b
Alias: si:dkey-173g15.1
Full Name: zinc finger matrin-type 4
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 119136 bases
Position: chrLG1:10387722-10506857
Accession: 102683157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000018995	zf-met	PF12874.7	4.1e-32	1	4
ENSLOCP00000018995	zf-met	PF12874.7	4.1e-32	2	4
ENSLOCP00000018995	zf-met	PF12874.7	4.1e-32	3	4
ENSLOCP00000018995	zf-met	PF12874.7	4.1e-32	4	4
ENSLOCP00000018994	zf-met	PF12874.7	4.1e-32	1	4
ENSLOCP00000018994	zf-met	PF12874.7	4.1e-32	2	4
ENSLOCP00000018994	zf-met	PF12874.7	4.1e-32	3	4
ENSLOCP00000018994	zf-met	PF12874.7	4.1e-32	4	4
ENSLOCP00000018993	zf-met	PF12874.7	7.8e-32	1	4
ENSLOCP00000018993	zf-met	PF12874.7	7.8e-32	2	4
ENSLOCP00000018993	zf-met	PF12874.7	7.8e-32	3	4
ENSLOCP00000018993	zf-met	PF12874.7	7.8e-32	4	4
ENSLOCP00000018995	zf-C2H2_jaz	PF12171.8	6.5e-25	1	2
ENSLOCP00000018995	zf-C2H2_jaz	PF12171.8	6.5e-25	2	2
ENSLOCP00000018994	zf-C2H2_jaz	PF12171.8	6.5e-25	1	2
ENSLOCP00000018994	zf-C2H2_jaz	PF12171.8	6.5e-25	2	2
ENSLOCP00000018993	zf-C2H2_jaz	PF12171.8	1.3e-24	1	2
ENSLOCP00000018993	zf-C2H2_jaz	PF12171.8	1.3e-24	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000019025	-	886	-	ENSLOCP00000018993	265 (aa)	-	W5NED4
ENSLOCT00000019026	-	856	XM_006625361	ENSLOCP00000018994	227 (aa)	XP_006625424	W5NED5
ENSLOCT00000019027	-	856	XM_006625362	ENSLOCP00000018995	227 (aa)	-	W5NED6

Gene Model

Click here to download ENSLOCG00000015435's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000015435's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000015435	zmat4b	98	64.758	ENSLOCG00000008863	zgc:171482	98	63.913
ENSLOCG00000015435	zmat4b	93	46.789	ENSLOCG00000012305	znf346	71	46.789