EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000015576 (Gene tree)
Gene ID: 102697663
Gene Symbol: zgc:100918
Alias: Rab7-like
Full Name: ras-related protein Rab-7a-like
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 40111 bases
Position: chrLG1:11902676-11942786
Accession: 102697663
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000019177	MMR_HSR1	PF01926.23	1.6e-07	1	1
ENSLOCP00000019176	MMR_HSR1	PF01926.23	2.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000019208	-	3600	-	ENSLOCP00000019176	205 (aa)	-	W5NEW7
ENSLOCT00000019209	-	3464	XM_006625586	ENSLOCP00000019177	206 (aa)	XP_006625649	W5NEW8

Gene Model

Click here to download ENSLOCG00000015576's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000015576's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000015576	zgc:100918	88	43.956	ENSLOCG00000012566	rab5c	83	43.956
ENSLOCG00000015576	zgc:100918	80	38.415	ENSLOCG00000005108	rab2a	75	38.415
ENSLOCG00000015576	zgc:100918	96	37.313	ENSLOCG00000015191	rab41	92	37.313
ENSLOCG00000015576	zgc:100918	82	39.306	ENSLOCG00000008865	rab11al	78	39.306
ENSLOCG00000015576	zgc:100918	88	32.597	ENSLOCG00000016767	rabl2	76	32.597
ENSLOCG00000015576	zgc:100918	96	30.144	ENSLOCG00000006748	-	96	30.144
ENSLOCG00000015576	zgc:100918	93	36.269	ENSLOCG00000005509	rab14	87	36.269
ENSLOCG00000015576	zgc:100918	97	34.804	ENSLOCG00000015358	rab33a	83	35.294
ENSLOCG00000015576	zgc:100918	80	41.420	ENSLOCG00000005904	zgc:101559	70	42.012
ENSLOCG00000015576	zgc:100918	95	52.041	ENSLOCG00000017482	rab9b	97	52.041
ENSLOCG00000015576	zgc:100918	90	30.811	ENSLOCG00000010440	nras	97	31.633
ENSLOCG00000015576	zgc:100918	74	32.051	ENSLOCG00000016464	si:cabz01085950.1	74	32.051
ENSLOCG00000015576	zgc:100918	82	40.588	ENSLOCG00000014692	zgc:171927	77	40.588
ENSLOCG00000015576	zgc:100918	87	33.333	ENSLOCG00000001886	mras	88	34.555
ENSLOCG00000015576	zgc:100918	81	36.310	ENSLOCG00000015825	-	77	36.310
ENSLOCG00000015576	zgc:100918	80	30.120	ENSLOCG00000017761	rasd4	78	30.120
ENSLOCG00000015576	zgc:100918	80	40.854	ENSLOCG00000007029	rab22a	82	40.854
ENSLOCG00000015576	zgc:100918	81	36.095	ENSLOCG00000014927	rab39bb	76	36.095
ENSLOCG00000015576	zgc:100918	100	56.311	ENSLOCG00000014749	si:dkey-13a21.4	100	56.311
ENSLOCG00000015576	zgc:100918	77	33.121	ENSLOCG00000015334	kras	88	33.333
ENSLOCG00000015576	zgc:100918	78	30.909	ENSLOCG00000007682	rhebl1	85	30.909
ENSLOCG00000015576	zgc:100918	80	35.366	ENSLOCG00000008881	rab25a	92	35.366
ENSLOCG00000015576	zgc:100918	82	39.053	ENSLOCG00000002680	rab12	67	39.053
ENSLOCG00000015576	zgc:100918	100	31.797	ENSLOCG00000012406	rab15	100	32.258
ENSLOCG00000015576	zgc:100918	84	38.764	ENSLOCG00000010535	rab33ba	75	38.764
ENSLOCG00000015576	zgc:100918	83	38.596	ENSLOCG00000016037	rab1ab	81	38.596
ENSLOCG00000015576	zgc:100918	87	35.196	ENSLOCG00000016999	rab23	79	35.385
ENSLOCG00000015576	zgc:100918	100	51.707	ENSLOCG00000017414	rab9a	99	51.707
ENSLOCG00000015576	zgc:100918	63	38.462	ENSLOCG00000002825	rab36	55	38.462
ENSLOCG00000015576	zgc:100918	81	39.521	ENSLOCG00000007491	rab18a	91	36.842
ENSLOCG00000015576	zgc:100918	86	42.373	ENSLOCG00000006591	rab5ab	80	42.373
ENSLOCG00000015576	zgc:100918	87	38.674	ENSLOCG00000001637	rab35b	85	38.674
ENSLOCG00000015576	zgc:100918	100	31.651	ENSLOCG00000003467	si:dkey-34d22.5	100	31.651
ENSLOCG00000015576	zgc:100918	90	35.450	ENSLOCG00000003453	rab42a	87	35.450
ENSLOCG00000015576	zgc:100918	95	52.041	ENSLOCG00000018352	rab9b	97	52.041
ENSLOCG00000015576	zgc:100918	82	39.412	ENSLOCG00000005884	rab30	81	39.412
ENSLOCG00000015576	zgc:100918	82	35.673	ENSLOCG00000016679	dnajc27	62	35.673
ENSLOCG00000015576	zgc:100918	73	30.000	ENSLOCG00000014424	rasl11a	61	30.000
ENSLOCG00000015576	zgc:100918	79	41.718	ENSLOCG00000013835	rab11a	72	41.718
ENSLOCG00000015576	zgc:100918	100	90.865	ENSLOCG00000014547	RAB7A	100	90.865
ENSLOCG00000015576	zgc:100918	74	33.113	ENSLOCG00000000684	hrasb	83	33.951