EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000015825 (Gene tree)
Gene ID: 102696031
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-39A-like
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 2922 bases
Position: chrLG1:15854498-15857419
Accession: 102696031
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000019479	MMR_HSR1	PF01926.23	4.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000019511	-	1604	XM_006625747	ENSLOCP00000019479	214 (aa)	XP_006625810	W5NFS0

Gene Model

Click here to download ENSLOCG00000015825's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000015825's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000015825	-	77	38.462	ENSLOCG00000005884	rab30	82	38.462
ENSLOCG00000015825	-	86	32.105	ENSLOCG00000014749	si:dkey-13a21.4	90	32.105
ENSLOCG00000015825	-	90	32.653	ENSLOCG00000005904	zgc:101559	75	32.653
ENSLOCG00000015825	-	74	34.783	ENSLOCG00000016999	rab23	68	35.673
ENSLOCG00000015825	-	78	39.157	ENSLOCG00000014692	zgc:171927	77	39.157
ENSLOCG00000015825	-	82	34.444	ENSLOCG00000015358	rab33a	74	34.444
ENSLOCG00000015825	-	96	33.971	ENSLOCG00000015191	rab41	93	33.971
ENSLOCG00000015825	-	76	31.515	ENSLOCG00000018104	rasd3	76	31.515
ENSLOCG00000015825	-	76	42.593	ENSLOCG00000007491	rab18a	78	42.593
ENSLOCG00000015825	-	77	36.364	ENSLOCG00000012566	rab5c	76	36.364
ENSLOCG00000015825	-	63	30.667	ENSLOCG00000010440	nras	85	32.121
ENSLOCG00000015825	-	71	35.294	ENSLOCG00000005802	rab34a	57	35.294
ENSLOCG00000015825	-	77	38.323	ENSLOCG00000017482	rab9b	81	38.323
ENSLOCG00000015825	-	89	38.220	ENSLOCG00000005108	rab2a	99	35.981
ENSLOCG00000015825	-	71	32.051	ENSLOCG00000002825	rab36	66	32.051
ENSLOCG00000015825	-	99	44.860	ENSLOCG00000014927	rab39bb	98	44.860
ENSLOCG00000015825	-	99	51.643	ENSLOCG00000003453	rab42a	100	51.643
ENSLOCG00000015825	-	96	32.547	ENSLOCG00000010535	rab33ba	86	32.547
ENSLOCG00000015825	-	79	37.647	ENSLOCG00000012406	rab15	79	37.647
ENSLOCG00000015825	-	99	46.759	ENSLOCG00000006748	-	100	46.759
ENSLOCG00000015825	-	84	37.778	ENSLOCG00000002680	rab12	71	37.778
ENSLOCG00000015825	-	60	33.846	ENSLOCG00000001886	mras	77	32.727
ENSLOCG00000015825	-	99	35.545	ENSLOCG00000016037	rab1ab	99	35.545
ENSLOCG00000015825	-	94	32.338	ENSLOCG00000007029	rab22a	96	32.338
ENSLOCG00000015825	-	95	31.628	ENSLOCG00000014547	RAB7A	95	31.628
ENSLOCG00000015825	-	77	38.323	ENSLOCG00000018352	rab9b	81	38.323
ENSLOCG00000015825	-	79	35.294	ENSLOCG00000001637	rab35b	81	35.294
ENSLOCG00000015825	-	80	38.953	ENSLOCG00000008865	rab11al	79	38.953
ENSLOCG00000015825	-	99	49.074	ENSLOCG00000003467	si:dkey-34d22.5	100	49.074
ENSLOCG00000015825	-	59	32.540	ENSLOCG00000015334	kras	91	31.461
ENSLOCG00000015825	-	95	32.683	ENSLOCG00000006591	rab5ab	89	32.683
ENSLOCG00000015825	-	98	37.264	ENSLOCG00000005509	rab14	97	37.264
ENSLOCG00000015825	-	53	34.513	ENSLOCG00000000684	hrasb	85	32.727
ENSLOCG00000015825	-	79	30.409	ENSLOCG00000016464	si:cabz01085950.1	84	30.409
ENSLOCG00000015825	-	77	37.195	ENSLOCG00000008881	rab25a	94	37.195
ENSLOCG00000015825	-	77	36.310	ENSLOCG00000015576	zgc:100918	81	36.310
ENSLOCG00000015825	-	71	32.895	ENSLOCG00000016767	rabl2	64	32.895
ENSLOCG00000015825	-	79	39.645	ENSLOCG00000013835	rab11a	76	39.645
ENSLOCG00000015825	-	77	36.527	ENSLOCG00000017414	rab9a	82	36.527