EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000015992 (Gene tree)
Gene ID: 102684674
Gene Symbol: snrpb2
Alias: im:7148817|mucMS2
Full Name: small nuclear ribonucleoprotein polypeptide B2
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 4223 bases
Position: chrLG16:7548123-7552345
Accession: 102684674
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000019695	RRM_5	PF13893.6	1.3e-06	1	2
ENSLOCP00000019695	RRM_5	PF13893.6	1.3e-06	2	2
ENSLOCP00000019692	RRM_5	PF13893.6	1.5e-06	1	2
ENSLOCP00000019692	RRM_5	PF13893.6	1.5e-06	2	2
ENSLOCP00000019695	RRM_1	PF00076.22	3.1e-27	1	2
ENSLOCP00000019695	RRM_1	PF00076.22	3.1e-27	2	2
ENSLOCP00000019692	RRM_1	PF00076.22	3.6e-27	1	2
ENSLOCP00000019692	RRM_1	PF00076.22	3.6e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000019727	-	1019	XM_006638584	ENSLOCP00000019695	220 (aa)	XP_006638647	W5NGD6
ENSLOCT00000019724	-	987	-	ENSLOCP00000019692	229 (aa)	-	W5NGD3

Gene Model

Click here to download ENSLOCG00000015992's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000015992's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000015992	snrpb2	99	55.197	ENSLOCG00000014661	SNRPA	70	72.165
ENSLOCG00000015992	snrpb2	53	31.624	ENSLOCG00000016481	sf3b6	59	34.615