EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000016037 (Gene tree)
Gene ID: 102687379
Gene Symbol: rab1ab
Alias: fb53a02|rab1a|si:zc101n13.3|wu:fb53a02
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 9994 bases
Position: chrLG16:8388410-8398403
Accession: 102687379
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000019755	MMR_HSR1	PF01926.23	1.1e-05	1	1
ENSLOCP00000019752	MMR_HSR1	PF01926.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000019788	-	618	-	ENSLOCP00000019755	205 (aa)	-	W5NGJ6
ENSLOCT00000019785	-	990	XM_006638599	ENSLOCP00000019752	205 (aa)	XP_006638662	W5NGJ3

Gene Model

Click here to download ENSLOCG00000016037's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000016037's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000016037	rab1ab	95	44.330	ENSLOCG00000006591	rab5ab	89	44.330
ENSLOCG00000016037	rab1ab	79	36.145	ENSLOCG00000014749	si:dkey-13a21.4	80	36.145
ENSLOCG00000016037	rab1ab	95	38.191	ENSLOCG00000015191	rab41	91	38.191
ENSLOCG00000016037	rab1ab	86	42.135	ENSLOCG00000003467	si:dkey-34d22.5	83	42.135
ENSLOCG00000016037	rab1ab	58	34.454	ENSLOCG00000012467	arl8a	61	34.454
ENSLOCG00000016037	rab1ab	81	38.596	ENSLOCG00000015576	zgc:100918	83	38.596
ENSLOCG00000016037	rab1ab	99	45.050	ENSLOCG00000005509	rab14	93	45.050
ENSLOCG00000016037	rab1ab	68	30.496	ENSLOCG00000012693	arl3	72	30.496
ENSLOCG00000016037	rab1ab	97	75.728	ENSLOCG00000014692	zgc:171927	97	75.728
ENSLOCG00000016037	rab1ab	84	44.253	ENSLOCG00000014927	rab39bb	80	44.253
ENSLOCG00000016037	rab1ab	75	37.419	ENSLOCG00000016767	rabl2	66	37.419
ENSLOCG00000016037	rab1ab	100	45.972	ENSLOCG00000008865	rab11al	98	45.972
ENSLOCG00000016037	rab1ab	76	39.623	ENSLOCG00000017414	rab9a	79	39.623
ENSLOCG00000016037	rab1ab	88	47.253	ENSLOCG00000007491	rab18a	97	45.050
ENSLOCG00000016037	rab1ab	60	33.333	ENSLOCG00000017515	arl4d	62	33.333
ENSLOCG00000016037	rab1ab	80	50.909	ENSLOCG00000012406	rab15	78	50.909
ENSLOCG00000016037	rab1ab	75	35.948	ENSLOCG00000016999	rab23	72	34.104
ENSLOCG00000016037	rab1ab	72	41.722	ENSLOCG00000002825	rab36	66	41.722
ENSLOCG00000016037	rab1ab	78	32.727	ENSLOCG00000016679	dnajc27	60	32.727
ENSLOCG00000016037	rab1ab	95	44.615	ENSLOCG00000012566	rab5c	90	44.615
ENSLOCG00000016037	rab1ab	58	31.667	ENSLOCG00000010957	arl8bb	62	31.667
ENSLOCG00000016037	rab1ab	83	33.721	ENSLOCG00000010004	rheb	92	33.721
ENSLOCG00000016037	rab1ab	92	45.960	ENSLOCG00000005904	zgc:101559	84	45.960
ENSLOCG00000016037	rab1ab	57	30.252	ENSLOCG00000010851	arl8	63	30.252
ENSLOCG00000016037	rab1ab	99	35.545	ENSLOCG00000015825	-	99	35.545
ENSLOCG00000016037	rab1ab	93	30.500	ENSLOCG00000014119	rasl11b	81	30.500
ENSLOCG00000016037	rab1ab	84	34.483	ENSLOCG00000007682	rhebl1	93	34.483
ENSLOCG00000016037	rab1ab	80	46.429	ENSLOCG00000015358	rab33a	70	46.429
ENSLOCG00000016037	rab1ab	90	48.649	ENSLOCG00000005108	rab2a	99	44.762
ENSLOCG00000016037	rab1ab	78	46.875	ENSLOCG00000008881	rab25a	93	46.875
ENSLOCG00000016037	rab1ab	95	39.175	ENSLOCG00000007029	rab22a	97	39.175
ENSLOCG00000016037	rab1ab	87	32.609	ENSLOCG00000016464	si:cabz01085950.1	90	32.609
ENSLOCG00000016037	rab1ab	77	40.373	ENSLOCG00000005802	rab34a	61	40.373
ENSLOCG00000016037	rab1ab	94	44.615	ENSLOCG00000006748	-	92	44.615
ENSLOCG00000016037	rab1ab	95	34.673	ENSLOCG00000017482	rab9b	97	34.673
ENSLOCG00000016037	rab1ab	83	30.814	ENSLOCG00000017737	-	86	30.814
ENSLOCG00000016037	rab1ab	81	52.410	ENSLOCG00000005884	rab30	82	52.410
ENSLOCG00000016037	rab1ab	79	65.432	ENSLOCG00000001637	rab35b	98	54.950
ENSLOCG00000016037	rab1ab	79	38.650	ENSLOCG00000010440	nras	85	38.650
ENSLOCG00000016037	rab1ab	81	39.766	ENSLOCG00000014547	RAB7A	82	39.766
ENSLOCG00000016037	rab1ab	87	43.094	ENSLOCG00000003453	rab42a	85	43.094
ENSLOCG00000016037	rab1ab	79	37.952	ENSLOCG00000018352	rab9b	82	37.952
ENSLOCG00000016037	rab1ab	85	45.251	ENSLOCG00000010535	rab33ba	77	45.251
ENSLOCG00000016037	rab1ab	80	38.415	ENSLOCG00000015334	kras	95	36.464
ENSLOCG00000016037	rab1ab	57	31.092	ENSLOCG00000017842	arl4cb	61	31.092
ENSLOCG00000016037	rab1ab	82	50.296	ENSLOCG00000002680	rab12	68	50.296
ENSLOCG00000016037	rab1ab	100	48.131	ENSLOCG00000013835	rab11a	97	48.131
ENSLOCG00000016037	rab1ab	84	37.143	ENSLOCG00000001886	mras	83	37.143
ENSLOCG00000016037	rab1ab	84	36.723	ENSLOCG00000000684	hrasb	93	36.723