EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000016221 (Gene tree)
Gene ID: 102690722
Gene Symbol: hbs1l
Alias: wu:fc23c07|zgc:55400
Full Name: HBS1 like translational GTPase
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 45839 bases
Position: chrLG1:26986775-27032613
Accession: 102690722
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000020004	GTP_EFTU	PF00009.27	8.2e-49	1	1
ENSLOCP00000020003	GTP_EFTU	PF00009.27	9.8e-49	1	1
ENSLOCP00000020004	MMR_HSR1	PF01926.23	1.3e-06	1	1
ENSLOCP00000020003	MMR_HSR1	PF01926.23	1.4e-06	1	1
ENSLOCP00000020004	GTP_EFTU_D2	PF03144.25	9.1e-09	1	1
ENSLOCP00000020003	GTP_EFTU_D2	PF03144.25	1.1e-08	1	1
ENSLOCP00000020004	GTP_EFTU_D3	PF03143.17	1e-27	1	1
ENSLOCP00000020003	GTP_EFTU_D3	PF03143.17	1.2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000020037	-	4849	-	ENSLOCP00000020004	708 (aa)	-	W5NH95
ENSLOCT00000020036	-	4951	XM_006625889	ENSLOCP00000020003	742 (aa)	-	W5NH94

Gene Model

Click here to download ENSLOCG00000016221's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000016221's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000016221	hbs1l	60	39.636	ENSLOCG00000000907	-	95	39.636
ENSLOCG00000016221	hbs1l	60	39.450	ENSLOCG00000004048	eef1a2	93	39.450
ENSLOCG00000016221	hbs1l	60	40.187	ENSLOCG00000007431	gspt1	74	40.187
ENSLOCG00000016221	hbs1l	60	39.593	ENSLOCG00000016168	eef1a1b	94	39.593
ENSLOCG00000016221	hbs1l	60	38.532	ENSLOCG00000011245	si:dkey-37o8.1	95	38.532