EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000016450 (Gene tree)
Gene ID: 102690003
Gene Symbol: si:ch73-252i11.1
Alias: -
Full Name: poly
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 15749 bases
Position: chrLG8:35842694-35858442
Accession: 102690003
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000020322	PARP	PF00644.20	6.4e-36	1	1
ENSLOCP00000020319	PARP	PF00644.20	6.7e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000020353	-	3988	XM_006633647	ENSLOCP00000020319	734 (aa)	XP_015208474	W5NI60
ENSLOCT00000020356	-	2523	-	ENSLOCP00000020322	760 (aa)	-	W5NI63

Gene Model

Click here to download ENSLOCG00000016450's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000016450's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000016450	si:ch73-252i11.1	95	40.970	ENSLOCG00000016455	-	98	44.562
ENSLOCG00000016450	si:ch73-252i11.1	90	42.351	ENSLOCG00000016964	parp12a	99	44.179
ENSLOCG00000016450	si:ch73-252i11.1	54	33.102	ENSLOCG00000016551	-	74	33.102
ENSLOCG00000016450	si:ch73-252i11.1	57	30.416	ENSLOCG00000003293	TIPARP	67	30.416