EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000016464 (Gene tree)
Gene ID: 102686679
Gene Symbol: si:cabz01085950.1
Alias: -
Full Name: RAS like estrogen regulated growth inhibitor
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 40191 bases
Position: chrLG8:36116468-36156658
Accession: 102686679
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000020338	MMR_HSR1	PF01926.23	4.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000020374	-	594	-	ENSLOCP00000020340	197 (aa)	-	W5NI81
ENSLOCT00000020372	-	1125	XM_006633630	ENSLOCP00000020338	199 (aa)	XP_006633693	W5NI79

Gene Model

Click here to download ENSLOCG00000016464's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000016464's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000016464	si:cabz01085950.1	83	32.164	ENSLOCG00000008865	rab11al	79	32.164
ENSLOCG00000016464	si:cabz01085950.1	71	34.483	ENSLOCG00000006787	nkiras1	77	34.483
ENSLOCG00000016464	si:cabz01085950.1	80	34.146	ENSLOCG00000005509	rab14	74	34.146
ENSLOCG00000016464	si:cabz01085950.1	74	32.051	ENSLOCG00000015576	zgc:100918	74	32.051
ENSLOCG00000016464	si:cabz01085950.1	87	40.805	ENSLOCG00000010440	nras	91	40.805
ENSLOCG00000016464	si:cabz01085950.1	81	33.929	ENSLOCG00000007491	rab18a	79	33.129
ENSLOCG00000016464	si:cabz01085950.1	93	30.159	ENSLOCG00000003453	rab42a	88	30.159
ENSLOCG00000016464	si:cabz01085950.1	73	34.899	ENSLOCG00000015191	rab41	69	34.899
ENSLOCG00000016464	si:cabz01085950.1	89	36.313	ENSLOCG00000018104	rasd3	84	36.313
ENSLOCG00000016464	si:cabz01085950.1	85	35.632	ENSLOCG00000005108	rab2a	80	35.632
ENSLOCG00000016464	si:cabz01085950.1	71	32.432	ENSLOCG00000015358	rab33a	60	32.432
ENSLOCG00000016464	si:cabz01085950.1	81	32.121	ENSLOCG00000012608	nkiras2	82	32.121
ENSLOCG00000016464	si:cabz01085950.1	83	30.233	ENSLOCG00000018352	rab9b	84	30.233
ENSLOCG00000016464	si:cabz01085950.1	71	32.432	ENSLOCG00000010535	rab33ba	63	32.432
ENSLOCG00000016464	si:cabz01085950.1	71	31.724	ENSLOCG00000008881	rab25a	83	31.724
ENSLOCG00000016464	si:cabz01085950.1	84	40.476	ENSLOCG00000000684	hrasb	88	40.476
ENSLOCG00000016464	si:cabz01085950.1	85	36.257	ENSLOCG00000007682	rhebl1	92	36.257
ENSLOCG00000016464	si:cabz01085950.1	74	32.051	ENSLOCG00000014547	RAB7A	73	32.051
ENSLOCG00000016464	si:cabz01085950.1	84	41.071	ENSLOCG00000015334	kras	96	39.891
ENSLOCG00000016464	si:cabz01085950.1	85	33.333	ENSLOCG00000010004	rheb	92	33.333
ENSLOCG00000016464	si:cabz01085950.1	81	32.530	ENSLOCG00000005884	rab30	80	32.530
ENSLOCG00000016464	si:cabz01085950.1	76	38.158	ENSLOCG00000001886	mras	84	37.500
ENSLOCG00000016464	si:cabz01085950.1	90	32.609	ENSLOCG00000016037	rab1ab	87	32.609
ENSLOCG00000016464	si:cabz01085950.1	83	33.333	ENSLOCG00000006748	-	78	33.333
ENSLOCG00000016464	si:cabz01085950.1	91	30.729	ENSLOCG00000005904	zgc:101559	79	30.729
ENSLOCG00000016464	si:cabz01085950.1	89	36.559	ENSLOCG00000017737	-	91	36.559
ENSLOCG00000016464	si:cabz01085950.1	81	30.909	ENSLOCG00000003467	si:dkey-34d22.5	76	30.909
ENSLOCG00000016464	si:cabz01085950.1	93	37.368	ENSLOCG00000014119	rasl11b	80	37.368
ENSLOCG00000016464	si:cabz01085950.1	81	33.133	ENSLOCG00000007029	rab22a	84	33.133
ENSLOCG00000016464	si:cabz01085950.1	97	30.808	ENSLOCG00000017761	rasd4	94	30.808
ENSLOCG00000016464	si:cabz01085950.1	85	31.792	ENSLOCG00000012566	rab5c	79	31.792
ENSLOCG00000016464	si:cabz01085950.1	82	38.922	ENSLOCG00000012406	rab15	78	38.922
ENSLOCG00000016464	si:cabz01085950.1	82	40.116	ENSLOCG00000014424	rasl11a	68	40.116
ENSLOCG00000016464	si:cabz01085950.1	90	31.351	ENSLOCG00000013835	rab11a	84	31.351
ENSLOCG00000016464	si:cabz01085950.1	71	37.241	ENSLOCG00000001637	rab35b	69	37.241
ENSLOCG00000016464	si:cabz01085950.1	75	34.641	ENSLOCG00000006591	rab5ab	69	34.641
ENSLOCG00000016464	si:cabz01085950.1	83	30.233	ENSLOCG00000017482	rab9b	84	30.233
ENSLOCG00000016464	si:cabz01085950.1	81	35.119	ENSLOCG00000014927	rab39bb	76	35.119
ENSLOCG00000016464	si:cabz01085950.1	84	30.409	ENSLOCG00000015825	-	79	30.409
ENSLOCG00000016464	si:cabz01085950.1	84	32.558	ENSLOCG00000014692	zgc:171927	79	32.558