EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000016466 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 18267 bases
Position: chrLG1:34873233-34891499
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000020341	zf-C2H2	PF00096.26	2.8e-81	1	13
ENSLOCP00000020341	zf-C2H2	PF00096.26	2.8e-81	2	13
ENSLOCP00000020341	zf-C2H2	PF00096.26	2.8e-81	3	13
ENSLOCP00000020341	zf-C2H2	PF00096.26	2.8e-81	4	13
ENSLOCP00000020341	zf-C2H2	PF00096.26	2.8e-81	5	13
ENSLOCP00000020341	zf-C2H2	PF00096.26	2.8e-81	6	13
ENSLOCP00000020341	zf-C2H2	PF00096.26	2.8e-81	7	13
ENSLOCP00000020341	zf-C2H2	PF00096.26	2.8e-81	8	13
ENSLOCP00000020341	zf-C2H2	PF00096.26	2.8e-81	9	13
ENSLOCP00000020341	zf-C2H2	PF00096.26	2.8e-81	10	13
ENSLOCP00000020341	zf-C2H2	PF00096.26	2.8e-81	11	13
ENSLOCP00000020341	zf-C2H2	PF00096.26	2.8e-81	12	13
ENSLOCP00000020341	zf-C2H2	PF00096.26	2.8e-81	13	13
ENSLOCP00000020341	zf-met	PF12874.7	1.7e-32	1	2
ENSLOCP00000020341	zf-met	PF12874.7	1.7e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000020375	-	2861	-	ENSLOCP00000020341	640 (aa)	-	W5NI82

Gene Model

Click here to download ENSLOCG00000016466's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000016466's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000016466	-	98	41.892	ENSLOCG00000003926	znf236	79	40.496
ENSLOCG00000016466	-	96	32.821	ENSLOCG00000005402	plag1	52	32.821
ENSLOCG00000016466	-	98	34.247	ENSLOCG00000004443	snai1a	68	34.247
ENSLOCG00000016466	-	88	49.091	ENSLOCG00000011702	rreb1b	51	37.805
ENSLOCG00000016466	-	98	40.571	ENSLOCG00000014366	-	99	40.541
ENSLOCG00000016466	-	98	32.298	ENSLOCG00000003678	znf319b	94	32.298
ENSLOCG00000016466	-	98	39.375	ENSLOCG00000005750	gfi1b	61	39.375
ENSLOCG00000016466	-	96	36.029	ENSLOCG00000007573	scrt1b	55	36.029
ENSLOCG00000016466	-	98	32.298	ENSLOCG00000000544	znf319b	94	32.298
ENSLOCG00000016466	-	98	50.485	ENSLOCG00000018285	-	100	50.485
ENSLOCG00000016466	-	99	35.362	ENSLOCG00000009778	prdm5	76	35.362
ENSLOCG00000016466	-	98	38.940	ENSLOCG00000014144	-	99	43.612
ENSLOCG00000016466	-	82	43.750	ENSLOCG00000001231	zbtb43	61	43.750
ENSLOCG00000016466	-	98	39.672	ENSLOCG00000017864	-	100	39.672
ENSLOCG00000016466	-	98	35.043	ENSLOCG00000004887	SNAI3	94	40.196
ENSLOCG00000016466	-	98	41.718	ENSLOCG00000004711	gfi1ab	54	41.718
ENSLOCG00000016466	-	98	46.486	ENSLOCG00000009974	zbtb49	58	46.486
ENSLOCG00000016466	-	98	38.182	ENSLOCG00000005992	SNAI2	69	37.500
ENSLOCG00000016466	-	99	44.857	ENSLOCG00000000714	-	91	44.872
ENSLOCG00000016466	-	98	42.400	ENSLOCG00000017422	-	70	42.400
ENSLOCG00000016466	-	98	37.891	ENSLOCG00000004661	-	99	37.891
ENSLOCG00000016466	-	99	33.011	ENSLOCG00000004208	-	99	33.444
ENSLOCG00000016466	-	99	39.013	ENSLOCG00000017736	znf648	63	39.013
ENSLOCG00000016466	-	95	31.088	ENSLOCG00000004586	zgc:112083	53	31.088
ENSLOCG00000016466	-	99	46.154	ENSLOCG00000002427	sall4	58	46.154