EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000016473 (Gene tree)
Gene ID: 102684776
Gene Symbol: ddx1
Alias: si:ch211-214k9.2|si:dkey-161f12.1
Full Name: DEAD-box helicase 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 14777 bases
Position: chrLG1:36226125-36240901
Accession: 102684776
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000020351	DEAD	PF00270.29	1.5e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000020385	-	2318	XM_006625944	ENSLOCP00000020351	746 (aa)	XP_006626007	W5NI92

Gene Model

Click here to download ENSLOCG00000016473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000016473's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000016473	ddx1	64	40.845	ENSLOCG00000002119	ddx49	85	40.845
ENSLOCG00000016473	ddx1	51	43.137	ENSLOCG00000000770	ddx6	67	43.137
ENSLOCG00000016473	ddx1	56	38.961	ENSLOCG00000005828	ddx55	63	38.961
ENSLOCG00000016473	ddx1	52	36.842	ENSLOCG00000010887	ddx4	70	36.842