EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000016550 (Gene tree)
Gene ID: 102683907
Gene Symbol: ascc3
Alias: si:ch73-374j3.1|zmp:0000000854
Full Name: activating signal cointegrator 1 complex subunit 3
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 371786 bases
Position: chrLG1:39645717-40017502
Accession: 102683907
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000020449	ResIII	PF04851.15	2.3e-25	1	2
ENSLOCP00000020449	ResIII	PF04851.15	2.3e-25	2	2
ENSLOCP00000020447	ResIII	PF04851.15	2.6e-25	1	2
ENSLOCP00000020447	ResIII	PF04851.15	2.6e-25	2	2
ENSLOCP00000020451	ResIII	PF04851.15	2.8e-25	1	2
ENSLOCP00000020451	ResIII	PF04851.15	2.8e-25	2	2
ENSLOCP00000020447	DEAD	PF00270.29	1.4e-51	1	2
ENSLOCP00000020447	DEAD	PF00270.29	1.4e-51	2	2
ENSLOCP00000020449	DEAD	PF00270.29	1.5e-51	1	2
ENSLOCP00000020449	DEAD	PF00270.29	1.5e-51	2	2
ENSLOCP00000020451	DEAD	PF00270.29	1.5e-51	1	2
ENSLOCP00000020451	DEAD	PF00270.29	1.5e-51	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000020482	-	6786	XM_006626024	ENSLOCP00000020447	2207 (aa)	XP_006626087	W5NII8
ENSLOCT00000020486	-	6786	-	ENSLOCP00000020451	2207 (aa)	-	W5NIJ2
ENSLOCT00000020484	-	6786	-	ENSLOCP00000020449	2207 (aa)	-	W5NIJ0

Gene Model

Click here to download ENSLOCG00000016550's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000016550's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000016550	ascc3	89	42.547	ENSLOCG00000015198	snrnp200	94	40.717
ENSLOCG00000016550	ascc3	58	33.692	ENSLOCG00000004931	hfm1	61	33.692