EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000016679 (Gene tree)
Gene ID: 102689035
Gene Symbol: dnajc27
Alias: rbj|zgc:194263|zgc:194279
Full Name: DnaJ heat shock protein family (Hsp40) member C27
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 13477 bases
Position: chrLG1:43909341-43922817
Accession: 102689035
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000020607	MMR_HSR1	PF01926.23	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000020642	-	5767	XM_006626048	ENSLOCP00000020607	273 (aa)	XP_006626111	W5NIZ8

Gene Model

Click here to download ENSLOCG00000016679's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000016679's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000016679	dnajc27	60	36.095	ENSLOCG00000017482	rab9b	81	36.095
ENSLOCG00000016679	dnajc27	58	34.810	ENSLOCG00000005108	rab2a	72	34.810
ENSLOCG00000016679	dnajc27	58	32.278	ENSLOCG00000005509	rab14	71	32.278
ENSLOCG00000016679	dnajc27	55	34.667	ENSLOCG00000005904	zgc:101559	62	34.667
ENSLOCG00000016679	dnajc27	60	34.524	ENSLOCG00000017414	rab9a	81	34.524
ENSLOCG00000016679	dnajc27	64	30.460	ENSLOCG00000013835	rab11a	77	30.460
ENSLOCG00000016679	dnajc27	59	34.375	ENSLOCG00000014749	si:dkey-13a21.4	77	34.375
ENSLOCG00000016679	dnajc27	69	30.319	ENSLOCG00000008865	rab11al	84	30.319
ENSLOCG00000016679	dnajc27	63	31.792	ENSLOCG00000014927	rab39bb	78	31.792
ENSLOCG00000016679	dnajc27	58	34.810	ENSLOCG00000005884	rab30	75	34.810
ENSLOCG00000016679	dnajc27	60	32.727	ENSLOCG00000016037	rab1ab	78	32.727
ENSLOCG00000016679	dnajc27	58	32.911	ENSLOCG00000014692	zgc:171927	72	32.911
ENSLOCG00000016679	dnajc27	59	32.099	ENSLOCG00000008881	rab25a	91	32.099
ENSLOCG00000016679	dnajc27	62	35.673	ENSLOCG00000015576	zgc:100918	82	35.673
ENSLOCG00000016679	dnajc27	60	36.095	ENSLOCG00000018352	rab9b	81	36.095
ENSLOCG00000016679	dnajc27	61	32.335	ENSLOCG00000007491	rab18a	79	32.335
ENSLOCG00000016679	dnajc27	64	30.857	ENSLOCG00000003467	si:dkey-34d22.5	79	31.214
ENSLOCG00000016679	dnajc27	60	31.325	ENSLOCG00000010535	rab33ba	70	31.325
ENSLOCG00000016679	dnajc27	58	36.478	ENSLOCG00000007029	rab22a	79	36.478
ENSLOCG00000016679	dnajc27	62	35.673	ENSLOCG00000014547	RAB7A	81	35.673
ENSLOCG00000016679	dnajc27	55	32.667	ENSLOCG00000015358	rab33a	61	32.667
ENSLOCG00000016679	dnajc27	59	32.919	ENSLOCG00000001637	rab35b	76	32.919