EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000016786 (Gene tree)
Gene ID: 102697528
Gene Symbol: ehd3
Alias: si:ch211-147c1.2
Full Name: EH domain-containing protein 3
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 43466 bases
Position: chrLG1:46262789-46306254
Accession: 102697528
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000020747	MMR_HSR1	PF01926.23	9.1e-09	1	1
ENSLOCP00000020749	MMR_HSR1	PF01926.23	4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000020783	-	1860	-	ENSLOCP00000020747	528 (aa)	XP_015208112	W5NJD8
ENSLOCT00000020785	-	1608	XM_006626089	ENSLOCP00000020749	535 (aa)	XP_006626152	W5NJE0

Gene Model

Click here to download ENSLOCG00000016786's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000016786's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000016786	ehd3	99	75.670	ENSLOCG00000009774	ehd4	97	74.109
ENSLOCG00000016786	ehd3	99	78.137	ENSLOCG00000000924	ehd1b	96	77.154
ENSLOCG00000016786	ehd3	71	33.248	ENSLOCG00000002644	srl	79	33.244