EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000016823 (Gene tree)
Gene ID: 102688287
Gene Symbol: cpsf3
Alias: si:dkey-81b15.1|wu:fc32f10|zgc:101655
Full Name: cleavage and polyadenylation specific factor 3
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 15216 bases
Position: chrLG1:49116402-49131617
Accession: 102688287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000020796	CPSF73-100_C	PF11718.8	2.7e-53	1	1
ENSLOCP00000020796	Beta-Casp	PF10996.8	4.2e-34	1	1
ENSLOCP00000020796	Lactamase_B	PF00753.27	9.6e-19	1	1
ENSLOCP00000020796	RMMBL	PF07521.12	1.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000020832	-	2606	XM_006626125	ENSLOCP00000020796	693 (aa)	XP_006626188	W5NJI7

Gene Model

Click here to download ENSLOCG00000016823's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000016823's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000016823	cpsf3	61	40.509	ENSLOCG00000002177	ints11	71	40.509