EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000016999 (Gene tree)
Gene ID: 102688268
Gene Symbol: rab23
Alias: zgc:110261
Full Name: RAB23%2C member RAS oncogene family
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 6574 bases
Position: chrLG16:19277948-19284521
Accession: 102688268
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000021015	MMR_HSR1	PF01926.23	7.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000021051	-	723	XM_006638695	ENSLOCP00000021015	240 (aa)	XP_006638758	W5NK56

Gene Model

Click here to download ENSLOCG00000016999's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000016999's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000016999	rab23	68	36.196	ENSLOCG00000008881	rab25a	83	37.063
ENSLOCG00000016999	rab23	61	40.397	ENSLOCG00000002825	rab36	61	37.857
ENSLOCG00000016999	rab23	65	39.241	ENSLOCG00000015191	rab41	69	39.041
ENSLOCG00000016999	rab23	71	36.047	ENSLOCG00000007491	rab18a	83	36.047
ENSLOCG00000016999	rab23	68	36.364	ENSLOCG00000014692	zgc:171927	69	37.671
ENSLOCG00000016999	rab23	69	30.286	ENSLOCG00000012608	nkiras2	61	31.148
ENSLOCG00000016999	rab23	79	35.385	ENSLOCG00000015576	zgc:100918	87	35.196
ENSLOCG00000016999	rab23	65	33.742	ENSLOCG00000015358	rab33a	63	33.113
ENSLOCG00000016999	rab23	76	34.197	ENSLOCG00000005904	zgc:101559	74	34.091
ENSLOCG00000016999	rab23	70	37.059	ENSLOCG00000006591	rab5ab	73	36.076
ENSLOCG00000016999	rab23	74	34.831	ENSLOCG00000001637	rab35b	84	35.260
ENSLOCG00000016999	rab23	66	32.099	ENSLOCG00000001886	mras	75	31.875
ENSLOCG00000016999	rab23	64	36.774	ENSLOCG00000010004	rheb	78	36.806
ENSLOCG00000016999	rab23	72	38.418	ENSLOCG00000014749	si:dkey-13a21.4	80	38.182
ENSLOCG00000016999	rab23	66	32.716	ENSLOCG00000015334	kras	85	32.716
ENSLOCG00000016999	rab23	60	32.192	ENSLOCG00000000684	hrasb	76	32.192
ENSLOCG00000016999	rab23	79	33.333	ENSLOCG00000013835	rab11a	79	33.526
ENSLOCG00000016999	rab23	66	36.875	ENSLOCG00000012566	rab5c	69	35.811
ENSLOCG00000016999	rab23	74	34.615	ENSLOCG00000018352	rab9b	80	33.529
ENSLOCG00000016999	rab23	69	34.731	ENSLOCG00000005108	rab2a	73	34.839
ENSLOCG00000016999	rab23	78	34.328	ENSLOCG00000006748	-	88	34.392
ENSLOCG00000016999	rab23	75	34.239	ENSLOCG00000005509	rab14	80	34.302
ENSLOCG00000016999	rab23	74	34.615	ENSLOCG00000017482	rab9b	80	33.529
ENSLOCG00000016999	rab23	65	32.704	ENSLOCG00000017737	-	73	31.081
ENSLOCG00000016999	rab23	65	32.317	ENSLOCG00000014119	rasl11b	63	30.921
ENSLOCG00000016999	rab23	68	37.349	ENSLOCG00000002680	rab12	62	37.662
ENSLOCG00000016999	rab23	65	35.849	ENSLOCG00000003453	rab42a	69	36.735
ENSLOCG00000016999	rab23	68	35.673	ENSLOCG00000015825	-	74	34.783
ENSLOCG00000016999	rab23	60	32.192	ENSLOCG00000010440	nras	76	32.192
ENSLOCG00000016999	rab23	73	34.286	ENSLOCG00000008865	rab11al	73	33.974
ENSLOCG00000016999	rab23	74	34.197	ENSLOCG00000014927	rab39bb	83	34.254
ENSLOCG00000016999	rab23	72	32.955	ENSLOCG00000003467	si:dkey-34d22.5	73	34.615
ENSLOCG00000016999	rab23	64	34.416	ENSLOCG00000007029	rab22a	73	33.803
ENSLOCG00000016999	rab23	64	38.710	ENSLOCG00000007682	rhebl1	78	38.889
ENSLOCG00000016999	rab23	63	41.026	ENSLOCG00000005802	rab34a	55	38.621
ENSLOCG00000016999	rab23	74	38.202	ENSLOCG00000005884	rab30	88	38.202
ENSLOCG00000016999	rab23	71	34.503	ENSLOCG00000012406	rab15	74	35.256
ENSLOCG00000016999	rab23	79	36.181	ENSLOCG00000014547	RAB7A	87	35.870
ENSLOCG00000016999	rab23	66	33.939	ENSLOCG00000010535	rab33ba	66	33.333
ENSLOCG00000016999	rab23	72	34.104	ENSLOCG00000016037	rab1ab	75	35.948
ENSLOCG00000016999	rab23	64	33.333	ENSLOCG00000017414	rab9a	73	31.973