EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000017119 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-125e8.4
Alias: -
Full Name: si:dkey-125e8.4
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 6010 bases
Position: chrLG8:49886077-49892086
Accession: ZDB-GENE-160113-103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000021155	MMR_HSR1	PF01926.23	8.6e-10	1	1
ENSLOCP00000021154	MMR_HSR1	PF01926.23	1.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000021191	-	1100	-	ENSLOCP00000021155	254 (aa)	-	W5NKJ6
ENSLOCT00000021190	-	852	-	ENSLOCP00000021154	284 (aa)	-	W5NKJ5

Gene Model

Click here to download ENSLOCG00000017119's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000017119's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000017119	si:dkey-125e8.4	85	51.163	ENSLOCG00000000272	-	88	43.564
ENSLOCG00000017119	si:dkey-125e8.4	82	47.030	ENSLOCG00000000277	-	67	47.619
ENSLOCG00000017119	si:dkey-125e8.4	84	49.302	ENSLOCG00000000336	-	80	48.848
ENSLOCG00000017119	si:dkey-125e8.4	85	40.000	ENSLOCG00000016496	-	63	40.000
ENSLOCG00000017119	si:dkey-125e8.4	74	47.120	ENSLOCG00000011904	-	95	47.120
ENSLOCG00000017119	si:dkey-125e8.4	77	45.652	ENSLOCG00000011098	-	92	45.652
ENSLOCG00000017119	si:dkey-125e8.4	81	40.291	ENSLOCG00000013437	-	95	40.291
ENSLOCG00000017119	si:dkey-125e8.4	76	43.939	ENSLOCG00000018072	-	89	41.441
ENSLOCG00000017119	si:dkey-125e8.4	73	62.937	ENSLOCG00000011879	-	83	62.937
ENSLOCG00000017119	si:dkey-125e8.4	76	43.434	ENSLOCG00000000082	-	83	41.850
ENSLOCG00000017119	si:dkey-125e8.4	96	48.276	ENSLOCG00000011761	-	76	48.252
ENSLOCG00000017119	si:dkey-125e8.4	85	41.475	ENSLOCG00000012075	-	89	43.590
ENSLOCG00000017119	si:dkey-125e8.4	71	39.779	ENSLOCG00000003059	-	85	39.779
ENSLOCG00000017119	si:dkey-125e8.4	77	45.960	ENSLOCG00000011755	-	86	41.909
ENSLOCG00000017119	si:dkey-125e8.4	76	44.949	ENSLOCG00000000385	-	75	42.241
ENSLOCG00000017119	si:dkey-125e8.4	81	36.842	ENSLOCG00000002945	-	75	36.364
ENSLOCG00000017119	si:dkey-125e8.4	74	51.872	ENSLOCG00000011913	-	96	52.083
ENSLOCG00000017119	si:dkey-125e8.4	85	49.309	ENSLOCG00000011850	-	88	47.257
ENSLOCG00000017119	si:dkey-125e8.4	89	45.532	ENSLOCG00000017850	-	78	45.532
ENSLOCG00000017119	si:dkey-125e8.4	76	54.404	ENSLOCG00000017851	-	100	54.404
ENSLOCG00000017119	si:dkey-125e8.4	72	46.774	ENSLOCG00000017852	-	69	46.774
ENSLOCG00000017119	si:dkey-125e8.4	80	41.546	ENSLOCG00000000517	-	63	42.029
ENSLOCG00000017119	si:dkey-125e8.4	88	45.175	ENSLOCG00000000328	-	91	45.175
ENSLOCG00000017119	si:dkey-125e8.4	85	51.852	ENSLOCG00000011841	-	82	51.562
ENSLOCG00000017119	si:dkey-125e8.4	76	49.749	ENSLOCG00000011883	-	84	49.749
ENSLOCG00000017119	si:dkey-125e8.4	80	48.187	ENSLOCG00000000257	-	95	48.187
ENSLOCG00000017119	si:dkey-125e8.4	85	49.254	ENSLOCG00000011925	-	94	49.254
ENSLOCG00000017119	si:dkey-125e8.4	92	48.511	ENSLOCG00000011715	-	76	48.511
ENSLOCG00000017119	si:dkey-125e8.4	72	43.478	ENSLOCG00000018071	-	67	39.720
ENSLOCG00000017119	si:dkey-125e8.4	85	52.850	ENSLOCG00000011853	-	94	52.792
ENSLOCG00000017119	si:dkey-125e8.4	85	45.050	ENSLOCG00000011749	-	96	44.762
ENSLOCG00000017119	si:dkey-125e8.4	88	40.840	ENSLOCG00000008631	-	93	39.721