EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000017196 (Gene tree)
Gene ID: 102698873
Gene Symbol: pum2
Alias: si:ch1073-351m12.1
Full Name: pumilio RNA binding family member 2
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 43929 bases
Position: chrLG1:62486149-62530077
Accession: 102698873
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000021256	PUF	PF00806.19	1.1e-72	1	8
ENSLOCP00000021256	PUF	PF00806.19	1.1e-72	2	8
ENSLOCP00000021256	PUF	PF00806.19	1.1e-72	3	8
ENSLOCP00000021256	PUF	PF00806.19	1.1e-72	4	8
ENSLOCP00000021256	PUF	PF00806.19	1.1e-72	5	8
ENSLOCP00000021256	PUF	PF00806.19	1.1e-72	6	8
ENSLOCP00000021256	PUF	PF00806.19	1.1e-72	7	8
ENSLOCP00000021256	PUF	PF00806.19	1.1e-72	8	8
ENSLOCP00000021255	PUF	PF00806.19	1.5e-70	1	8
ENSLOCP00000021255	PUF	PF00806.19	1.5e-70	2	8
ENSLOCP00000021255	PUF	PF00806.19	1.5e-70	3	8
ENSLOCP00000021255	PUF	PF00806.19	1.5e-70	4	8
ENSLOCP00000021255	PUF	PF00806.19	1.5e-70	5	8
ENSLOCP00000021255	PUF	PF00806.19	1.5e-70	6	8
ENSLOCP00000021255	PUF	PF00806.19	1.5e-70	7	8
ENSLOCP00000021255	PUF	PF00806.19	1.5e-70	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000021291	-	6408	XM_015357032	ENSLOCP00000021255	1222 (aa)	XP_015212518	W5NKU6
ENSLOCT00000021292	-	6324	XM_006626349	ENSLOCP00000021256	1194 (aa)	XP_006626412	W5NKU7

Gene Model

Click here to download ENSLOCG00000017196's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000017196's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000017196	pum2	100	72.682	ENSLOCG00000005210	pum1	96	76.042