EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000017736 (Gene tree)
Gene ID: -
Gene Symbol: znf648
Alias: si:dkey-44g17.4
Full Name: zinc finger protein 648
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 1143 bases
Position: chrLG10:6158478-6159620
Accession: ZDB-GENE-120215-149
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000021840	zf-C2H2	PF00096.26	6e-40	1	7
ENSLOCP00000021840	zf-C2H2	PF00096.26	6e-40	2	7
ENSLOCP00000021840	zf-C2H2	PF00096.26	6e-40	3	7
ENSLOCP00000021840	zf-C2H2	PF00096.26	6e-40	4	7
ENSLOCP00000021840	zf-C2H2	PF00096.26	6e-40	5	7
ENSLOCP00000021840	zf-C2H2	PF00096.26	6e-40	6	7
ENSLOCP00000021840	zf-C2H2	PF00096.26	6e-40	7	7
ENSLOCP00000021840	zf-met	PF12874.7	6.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000021878	-	1143	-	ENSLOCP00000021840	381 (aa)	-	W5NMI1

Gene Model

Click here to download ENSLOCG00000017736's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000017736's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000017736	znf648	59	40.952	ENSLOCG00000005992	SNAI2	50	40.952
ENSLOCG00000017736	znf648	62	45.128	ENSLOCG00000017864	-	99	45.128
ENSLOCG00000017736	znf648	71	37.143	ENSLOCG00000004443	snai1a	56	39.041
ENSLOCG00000017736	znf648	57	47.273	ENSLOCG00000018285	-	100	47.273
ENSLOCG00000017736	znf648	71	42.328	ENSLOCG00000004208	-	99	42.328
ENSLOCG00000017736	znf648	75	42.079	ENSLOCG00000017422	-	71	42.640
ENSLOCG00000017736	znf648	62	38.938	ENSLOCG00000000544	znf319b	88	39.381
ENSLOCG00000017736	znf648	65	41.129	ENSLOCG00000004661	-	99	42.986
ENSLOCG00000017736	znf648	62	40.686	ENSLOCG00000000714	-	93	40.686
ENSLOCG00000017736	znf648	57	42.574	ENSLOCG00000007573	scrt1b	50	36.957
ENSLOCG00000017736	znf648	62	40.000	ENSLOCG00000009778	prdm5	73	35.802
ENSLOCG00000017736	znf648	62	34.272	ENSLOCG00000011452	znf652	53	38.532
ENSLOCG00000017736	znf648	58	32.000	ENSLOCG00000003238	si:dkey-89b17.4	53	31.818
ENSLOCG00000017736	znf648	61	31.754	ENSLOCG00000000947	znf341	50	32.057
ENSLOCG00000017736	znf648	84	41.111	ENSLOCG00000003926	znf236	58	40.659
ENSLOCG00000017736	znf648	62	42.453	ENSLOCG00000004887	SNAI3	91	42.453
ENSLOCG00000017736	znf648	72	46.104	ENSLOCG00000014144	-	100	46.104
ENSLOCG00000017736	znf648	63	39.013	ENSLOCG00000016466	-	99	39.013
ENSLOCG00000017736	znf648	59	38.509	ENSLOCG00000005750	gfi1b	50	38.509
ENSLOCG00000017736	znf648	74	39.113	ENSLOCG00000014366	-	84	39.113
ENSLOCG00000017736	znf648	62	38.938	ENSLOCG00000003678	znf319b	88	39.381